Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   R5028_RS20135 Genome accession   NZ_CP137486
Coordinates   4282039..4282446 (-) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain HPA2660     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4277039..4287446
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R5028_RS20115 (R5028_20115) pilK 4277971..4278846 (-) 876 WP_003100938.1 type 4 fimbrial methyltransferase PilK -
  R5028_RS20120 (R5028_20120) pilJ 4278907..4280955 (-) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  R5028_RS20125 (R5028_20125) - 4281040..4281576 (-) 537 WP_003084590.1 chemotaxis protein CheW -
  R5028_RS20130 (R5028_20130) pilH 4281627..4281992 (-) 366 WP_003084587.1 twitching motility response regulator PilH -
  R5028_RS20135 (R5028_20135) pilG 4282039..4282446 (-) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  R5028_RS20140 (R5028_20140) gshB 4282701..4283654 (+) 954 WP_003100943.1 glutathione synthase -
  R5028_RS20145 (R5028_20145) - 4283801..4284694 (+) 894 WP_003162015.1 energy transducer TonB -
  R5028_RS20150 (R5028_20150) - 4284743..4285312 (+) 570 WP_003100947.1 YqgE/AlgH family protein -
  R5028_RS20155 (R5028_20155) ruvX 4285312..4285746 (+) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  R5028_RS20160 (R5028_20160) pyrR 4285858..4286370 (+) 513 WP_023097137.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  R5028_RS20165 (R5028_20165) - 4286394..4287398 (+) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=898276 R5028_RS20135 WP_003084583.1 4282039..4282446(-) (pilG) [Pseudomonas aeruginosa strain HPA2660]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=898276 R5028_RS20135 WP_003084583.1 4282039..4282446(-) (pilG) [Pseudomonas aeruginosa strain HPA2660]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACTCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385