Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   R5U33_RS05810 Genome accession   NZ_CP137461
Coordinates   1209116..1210384 (-) Length   422 a.a.
NCBI ID   WP_002326916.1    Uniprot ID   -
Organism   Enterococcus faecium strain C10-7     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1204116..1215384
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R5U33_RS05805 (R5U33_05805) - 1207339..1209048 (-) 1710 WP_317910713.1 proline--tRNA ligase -
  R5U33_RS05810 (R5U33_05810) eeP 1209116..1210384 (-) 1269 WP_002326916.1 RIP metalloprotease RseP Regulator
  R5U33_RS05815 (R5U33_05815) - 1210545..1211345 (-) 801 WP_002319366.1 phosphatidate cytidylyltransferase -
  R5U33_RS05820 (R5U33_05820) - 1211342..1212154 (-) 813 WP_002294134.1 isoprenyl transferase -
  R5U33_RS05825 (R5U33_05825) - 1212317..1213489 (-) 1173 WP_002334076.1 IS256-like element IS256 family transposase -
  R5U33_RS05830 (R5U33_05830) frr 1213682..1214239 (-) 558 WP_002293875.1 ribosome recycling factor -
  R5U33_RS05835 (R5U33_05835) pyrH 1214242..1214964 (-) 723 WP_002297402.1 UMP kinase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46090.54 Da        Isoelectric Point: 4.8405

>NTDB_id=898052 R5U33_RS05810 WP_002326916.1 1209116..1210384(-) (eeP) [Enterococcus faecium strain C10-7]
MKTILTFIIVFGILVIVHEFGHFFFAKRSGILVREFAIGMGPKIYGHQAKDGTTYTLRLLPIGGYVRMAGNGDDETEMAP
GMPLSLLLNSDGIVEKINLSKKIQLTNAIPMELSRYDLEDELTITGYVNGDETEVVTYPVDHDATIIENDGTEIRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFILAILLFIILAFMQGGVQVTNTNRVGEIMPNGAAAEAGLKENDEVVSVDGKEIHSWN
DLTTVITKNPGKTLDFKIEREGQVQSVDVTPKSVESNGEKVGQLGIKAPMNTGFMDKIIGGTRQAFSGSLEIFKALGSLF
TGFSLDKLGGPVMMYQLSSEAANQGVTTVISLMALLSMNLGIVNLLPIPALDGGKLVLNIFEGIRGKPLSQEKEGILTLA
GFGFLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=898052 R5U33_RS05810 WP_002326916.1 1209116..1210384(-) (eeP) [Enterococcus faecium strain C10-7]
ATGAAAACGATTCTGACATTTATCATCGTTTTTGGTATATTAGTGATTGTTCATGAGTTTGGTCATTTCTTCTTTGCGAA
ACGATCAGGAATCCTCGTTCGCGAATTTGCTATCGGTATGGGTCCGAAAATTTATGGGCATCAAGCAAAAGACGGGACAA
CATATACGCTTCGCCTATTACCTATTGGCGGTTATGTTCGAATGGCAGGCAATGGGGATGATGAAACAGAAATGGCACCA
GGAATGCCTCTTTCTCTTTTACTAAATTCTGACGGCATCGTAGAGAAGATAAATTTAAGTAAGAAAATCCAATTGACAAA
TGCTATCCCGATGGAATTGAGCCGTTATGATTTAGAAGATGAGCTGACTATCACTGGTTATGTGAATGGAGACGAAACAG
AAGTAGTAACCTACCCTGTTGATCACGATGCGACGATTATTGAAAACGACGGAACAGAAATCAGAATTGCGCCAAAAGAC
GTACAGTTCCAATCGGCTAAATTGTGGCAGCGTATGCTGACCAACTTTGCTGGACCCATGAATAACTTTATTTTGGCAAT
CCTGTTATTCATCATTCTGGCATTTATGCAAGGTGGTGTTCAAGTGACGAACACTAATCGCGTAGGAGAGATCATGCCTA
ATGGAGCTGCGGCAGAAGCAGGCTTAAAAGAAAATGATGAGGTAGTCAGTGTGGACGGAAAAGAAATCCATTCATGGAAT
GATCTGACAACAGTCATTACGAAAAATCCAGGTAAAACATTAGACTTTAAGATCGAACGAGAAGGTCAGGTGCAATCTGT
CGACGTGACACCGAAATCTGTAGAGTCAAATGGCGAAAAAGTTGGCCAACTTGGTATAAAAGCCCCAATGAATACAGGTT
TTATGGATAAGATCATTGGAGGGACGCGTCAAGCTTTCAGCGGTTCATTGGAAATTTTCAAAGCCTTAGGATCACTATTT
ACAGGTTTCAGTTTAGATAAATTAGGCGGACCTGTCATGATGTACCAATTGTCTTCAGAAGCAGCAAATCAAGGTGTAAC
AACTGTTATTAGTTTGATGGCGCTTCTTTCAATGAATCTCGGAATCGTCAATCTGCTTCCGATTCCTGCCTTAGATGGCG
GGAAATTAGTCTTGAATATTTTTGAAGGGATTCGCGGGAAACCATTAAGTCAAGAAAAAGAAGGAATATTGACATTAGCT
GGCTTTGGATTTTTAATGTTGTTGATGGTGCTAGTTACATGGAACGATATTCAACGATTCTTTTTCTAG

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(199-270)

Peptidase family M50 (Peptidase_M50)

(6-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

54.439

100

0.552
  eeP Streptococcus thermophilus LMG 18311

54.206

100

0.55