Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   R5H20_RS18680 Genome accession   NZ_CP137345
Coordinates   3642835..3645147 (-) Length   770 a.a.
NCBI ID   WP_006638894.1    Uniprot ID   M5P0P3
Organism   Bacillus sp. KICET-3     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3637835..3650147
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R5H20_RS18640 (R5H20_18640) - 3638297..3638728 (+) 432 WP_006638886.1 Na(+)/H(+) antiporter subunit B -
  R5H20_RS18645 (R5H20_18645) - 3638728..3639069 (+) 342 WP_006638887.1 Na(+)/H(+) antiporter subunit C -
  R5H20_RS18650 (R5H20_18650) - 3639062..3640540 (+) 1479 WP_006638888.1 Na+/H+ antiporter subunit D -
  R5H20_RS18655 (R5H20_18655) - 3640546..3641022 (+) 477 WP_006638889.1 Na+/H+ antiporter subunit E -
  R5H20_RS18660 (R5H20_18660) - 3641022..3641306 (+) 285 WP_006638890.1 Na(+)/H(+) antiporter subunit F1 -
  R5H20_RS18665 (R5H20_18665) mnhG 3641290..3641664 (+) 375 WP_006638891.1 monovalent cation/H(+) antiporter subunit G -
  R5H20_RS18670 (R5H20_18670) - 3641704..3642096 (-) 393 WP_006638892.1 hotdog fold thioesterase -
  R5H20_RS18675 (R5H20_18675) comA 3642115..3642753 (-) 639 WP_006638893.1 response regulator transcription factor Regulator
  R5H20_RS18680 (R5H20_18680) comP 3642835..3645147 (-) 2313 WP_006638894.1 ATP-binding protein Regulator
  R5H20_RS18685 (R5H20_18685) comX 3645162..3645335 (-) 174 WP_006638895.1 competence pheromone ComX -
  R5H20_RS18690 (R5H20_18690) - 3645319..3646218 (-) 900 WP_006638896.1 polyprenyl synthetase family protein -
  R5H20_RS18695 (R5H20_18695) degQ 3646407..3646547 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  R5H20_RS18700 (R5H20_18700) - 3647040..3647381 (+) 342 WP_224254434.1 hypothetical protein -
  R5H20_RS18705 (R5H20_18705) - 3647428..3648645 (-) 1218 WP_006638898.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 88919.75 Da        Isoelectric Point: 8.3423

>NTDB_id=897608 R5H20_RS18680 WP_006638894.1 3642835..3645147(-) (comP) [Bacillus sp. KICET-3]
MKSIYNKLSVILILWSFIFVIYVCYITINNNLVGLKVTNINEHSLKVVEVEKHSLAGTYAELKKGDIIHKINGGPVPVKK
DKEYTLSNVLTLTIERDGKIYENDSLDYLNLVSYDSFFIFIIPIIFYFLSLVCAFFILKANKSKNLFSALLLIIFLLVVS
IAYVSAGTVARGDKLSRFVNILTFLSVPTSYLHFIYQYFKELGKKLFSRKVFFLYLIPFINVLIEIGSYLSDFGNDYVRS
INLLSFFVAAIIVFTLIVYSLVKYKYSQQSYLLKILMLTNFIALVPFLFFYVLPMLFLGDYIFSAIVVSPFLLLIPLSLV
YQFMSNKIYDIEFLIGRLKYYSFLAIIPTSIIITILGLLKHQEGEFYTIKITVFTYLIMLGVFYLKEIIDFRFRLKRFSE
KFNYQDSIFKFTQMIRTFTSLNQVLLELKQAILDVLTVSQAHVLKVKNDGTISLLEGETEDYPWIPYEKEVSKVIAEIGK
IIEVDRGFLIKIGERGGTSYVMLCLSMLNTPRLTRDEISWLETLAFYTSVSLENVLKIGELMEHLENVKKEGPNPAWLNK
LMFAIEEKQRSDLARDLHDSVLQDMISLKHQSEMFLADFEKDKVCTSQIQQRLINMNEQMSNVIQTTRETCQELRPQLLY
DLGLVKALSKLVAQHQESSSIRIRLNTERFSKVLDLDTQLNLYRIVQELLNNAVKHSKAHEILIMLVCIKEKVVLHYEDD
GVGFDQDKLYQNKTGMGLSGIRERVRALDGNLEIKTAEGKGFRVIIEMEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=897608 R5H20_RS18680 WP_006638894.1 3642835..3645147(-) (comP) [Bacillus sp. KICET-3]
ATGAAATCGATATATAATAAGCTGTCTGTAATTTTAATTTTGTGGAGCTTTATATTTGTTATATACGTTTGTTACATTAC
CATTAATAATAATTTGGTTGGTTTAAAAGTAACGAACATAAATGAACACAGTCTTAAAGTTGTGGAAGTTGAAAAACATT
CTTTAGCAGGCACTTATGCAGAATTAAAAAAAGGAGATATCATTCATAAAATTAATGGCGGTCCAGTCCCGGTAAAAAAG
GATAAGGAGTATACGCTGTCCAATGTTTTAACCTTAACAATTGAAAGAGACGGCAAAATATATGAGAATGATTCTCTGGA
TTATTTGAATTTAGTCAGCTATGACAGCTTTTTTATATTTATTATTCCAATAATATTTTATTTTTTAAGTTTAGTTTGCG
CATTTTTTATTTTAAAAGCAAATAAATCCAAAAATCTATTTTCAGCACTATTATTGATCATTTTTCTTCTTGTTGTTTCT
ATAGCATATGTTAGTGCAGGAACAGTTGCGAGAGGGGATAAGTTAAGCCGGTTTGTTAATATACTTACTTTTTTAAGTGT
TCCAACCAGCTATTTGCATTTTATTTATCAATATTTTAAAGAACTAGGAAAGAAATTATTTAGCAGAAAAGTTTTCTTTC
TATATTTAATTCCGTTTATAAATGTTCTAATAGAAATAGGGTCGTATTTGAGCGATTTTGGAAACGATTATGTTAGAAGC
ATAAATTTATTGTCATTTTTCGTTGCAGCAATTATTGTATTTACATTAATTGTCTATTCTTTAGTTAAATACAAGTATTC
TCAACAATCTTACTTATTGAAGATTCTAATGTTGACAAATTTTATTGCATTGGTGCCGTTTTTATTTTTTTATGTACTTC
CTATGCTATTTTTAGGTGATTATATTTTTTCAGCAATTGTAGTGTCGCCGTTCCTTTTACTTATTCCGCTTTCCCTGGTT
TATCAATTTATGTCAAATAAGATTTATGATATTGAATTTCTTATTGGTCGGCTTAAATATTATAGCTTTTTAGCTATCAT
ACCGACATCAATTATTATCACCATTTTAGGCTTACTGAAACATCAAGAAGGAGAATTTTATACAATAAAGATCACTGTAT
TCACTTATCTTATTATGCTTGGCGTCTTTTATTTAAAAGAAATCATCGACTTCCGCTTTCGTTTAAAGAGATTTTCAGAG
AAGTTTAACTATCAAGACAGCATCTTTAAATTTACGCAAATGATCCGGACATTTACGTCTTTGAATCAAGTCCTATTAGA
ATTGAAGCAAGCGATACTGGATGTGCTGACTGTCAGCCAAGCACATGTATTGAAAGTGAAAAACGACGGAACGATTTCTT
TGCTGGAAGGAGAGACGGAAGATTACCCTTGGATTCCATATGAAAAAGAAGTCTCCAAGGTCATCGCCGAAATCGGCAAA
ATCATCGAAGTCGACCGCGGGTTTTTGATTAAGATCGGTGAACGGGGCGGGACGTCTTATGTCATGCTGTGTCTGTCAAT
GCTAAATACGCCCAGGCTCACCCGCGATGAAATTTCCTGGCTTGAGACGCTGGCGTTTTATACGAGTGTTTCCTTGGAAA
ACGTGTTGAAAATCGGCGAGCTGATGGAGCATCTTGAGAATGTGAAAAAGGAAGGGCCGAATCCGGCTTGGCTGAATAAG
CTGATGTTTGCGATTGAGGAGAAGCAGAGATCTGATTTGGCAAGGGATTTACACGATTCGGTGCTTCAGGATATGATTTC
TTTGAAGCATCAAAGCGAGATGTTTCTTGCCGATTTTGAAAAGGATAAAGTCTGTACCTCTCAAATACAGCAAAGGCTGA
TCAATATGAATGAACAAATGTCAAATGTGATTCAGACGACGAGGGAAACGTGCCAGGAGCTCCGGCCGCAGCTGCTGTAT
GATCTAGGCCTTGTTAAGGCGCTCTCCAAACTGGTGGCGCAGCATCAGGAATCCTCATCGATCCGCATTCGTTTAAACAC
GGAAAGGTTTTCAAAAGTGCTGGATCTTGATACACAGCTGAATTTGTACAGAATCGTGCAGGAGCTGTTGAACAATGCGG
TTAAACATTCAAAGGCGCACGAGATTCTGATTATGCTCGTTTGCATTAAAGAAAAGGTCGTCCTTCATTATGAGGATGAC
GGTGTCGGCTTTGATCAGGACAAGCTTTATCAGAACAAAACAGGCATGGGGCTGTCGGGCATCCGTGAGCGGGTCCGCGC
ATTGGACGGCAATCTTGAAATTAAAACAGCTGAGGGAAAAGGATTCAGGGTCATTATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB M5P0P3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

54.086

100

0.542