Detailed information NTG0897150

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: ABC804_RS01775
• Genome accession: NZ_CP155536
• Coordinates: 321734..322633 (+)
• Length: 299 a.a.
• NCBI ID: WP_000904867.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain M264-3
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 316734..327633

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABC804_RS01745 (ABC804_01745)	-	317165..317458 (+)	294	WP_000977365.1	hypothetical protein	-
ABC804_RS01750 (ABC804_01750)	-	317614..318828 (+)	1215	WP_000666469.1	pyridoxal phosphate-dependent aminotransferase	-
ABC804_RS01755 (ABC804_01755)	rpmH	318973..319107 (+)	135	WP_000831906.1	50S ribosomal protein L34	-
ABC804_RS01760 (ABC804_01760)	-	319283..320023 (+)	741	WP_350339813.1	DUF1542 domain-containing protein	-
ABC804_RS01765 (ABC804_01765)	-	320329..321102 (+)	774	WP_000575607.1	TatD family hydrolase	-
ABC804_RS01770 (ABC804_01770)	rnmV	321102..321662 (+)	561	WP_000664448.1	ribonuclease M5	-
ABC804_RS01775 (ABC804_01775)	comR	321734..322633 (+)	900	WP_000904867.1	helix-turn-helix domain-containing protein	Regulator
ABC804_RS01780 (ABC804_01780)	-	322953..323249 (+)	297	WP_000815394.1	lactococcin 972 family bacteriocin	-
ABC804_RS01785 (ABC804_01785)	-	323326..325356 (+)	2031	WP_000825263.1	bacteriocin-associated integral membrane family protein	-
ABC804_RS01790 (ABC804_01790)	-	325358..325999 (+)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
ABC804_RS01795 (ABC804_01795)	-	325992..326300 (+)	309	WP_000333257.1	hypothetical protein	-
ABC804_RS01800 (ABC804_01800)	rsmA	326431..327303 (+)	873	WP_001216830.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35191.04 Da
• Isoelectric Point: 5.0703

>NTDB_id=897150 ABC804_RS01775 WP_000904867.1 321734..322633(+) (comR) [Streptococcus pneumoniae strain M264-3]
MLIGQKIKEIRIEKGISRPDFCGDEQGLTVRQLSRIESGASQPSLPKLAYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEAYSINDMLL
IRLFFYQMLIRKDLAKFINQIEKLMLFLLEQKKVTQIENYFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALRVERDFSLAESFYQSSKTFAKLIGDGFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=897150 ABC804_RS01775 WP_000904867.1 321734..322633(+) (comR) [Streptococcus pneumoniae strain M264-3]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGG
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGCCTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATTATAGAAAAAGAAGCTTATTCAATAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAAAGCTAATGCTCTT
TCTTTTGGAACAGAAGAAGGTAACTCAAATAGAGAATTACTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCTTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGTAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGAAGCTAATTGGAGATGGATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• Helix-turn-helix (HTH_3) (7-59)

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus suis P1/7	37.801	97.324	0.368
comR	Streptococcus suis 05ZYH33	37.801	97.324	0.368