Detailed information NTG0896458

Bioinformatically predicted

Overview

• Name: luxQ
• Type: Regulator
• Locus tag: R4540_RS16885
• Genome accession: NZ_CP137136
• Coordinates: 661102..663675 (-)
• Length: 857 a.a.
• NCBI ID: WP_001026312.1
• Uniprot ID: -
• Organism: Vibrio cholerae V52
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 656102..668675

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4540_RS16865 (R4540_16880)	-	658540..658845 (-)	306	WP_001181132.1	hypothetical protein	-
R4540_RS16870 (R4540_16885)	-	659047..659445 (+)	399	WP_000831416.1	YgiW/YdeI family stress tolerance OB fold protein	-
R4540_RS16875 (R4540_16890)	-	659683..660201 (+)	519	WP_000914961.1	hypothetical protein	-
R4540_RS16880 (R4540_16895)	-	660445..661110 (+)	666	WP_000268198.1	flagellar brake protein	-
R4540_RS16885 (R4540_16900)	luxQ	661102..663675 (-)	2574	WP_001026312.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
R4540_RS16890 (R4540_16905)	luxP	663693..664787 (-)	1095	WP_000823677.1	substrate-binding domain-containing protein	Regulator
R4540_RS16895 (R4540_16910)	traF	664999..666159 (-)	1161	WP_001025868.1	conjugal transfer protein TraF	-
R4540_RS16900 (R4540_16915)	-	666261..666566 (-)	306	WP_000448828.1	GIY-YIG nuclease family protein	-
R4540_RS16905 (R4540_16920)	-	666566..667216 (-)	651	WP_001025632.1	YceH family protein	-
R4540_RS16910 (R4540_16925)	-	667258..667455 (-)	198	WP_001246071.1	hypothetical protein	-
R4540_RS16915 (R4540_16930)	-	667643..667963 (+)	321	WP_001089529.1	DUF496 family protein	-
R4540_RS16920 (R4540_16935)	-	668376..668627 (+)	252	WP_001882582.1	YgjV family protein	-

Sequence

Protein

• Length: 857 a.a.
• Molecular weight: 96960.78 Da
• Isoelectric Point: 6.0203

>NTDB_id=896458 R4540_RS16885 WP_001026312.1 661102..663675(-) (luxQ) [Vibrio cholerae V52]
MNIRPSQIKHKQRIASFITHAVVVVMGVLIVSVLFQSYQISSRLMSQEGQRTSVQTSSLIQSLFDFRLAALRIHQDSTAK
NASLINALVSRDSSRLDEFFSSVDELELSNAPDLRFISSHDNILWDDGNASFYGIAQQELNKLIRRVAISGNWHLVQTPS
EGKSVHILMRRSSLIEAGTGQVVGYLYVGIVLNDNFALLENIRSGSNSENLVLAVDTTPLVSTLKGNEPYSLDYVVHSAK
DAMRDSFIVGQTFLEVESVPTYLCVYSIQTNQNVLTLRDNFYFWMAFALISMIGVSIASRWWLQKRIQREIETLMNYTHK
LMDLDTKSEFIGSKIYEFDYFGRTLEQSFRRLANKEKQFEDLFNFALSPTMLWNTSGRLIRMNPSAQIQFLREDAQNHFL
FEILERQLLPTITKAAQGDNPSDVTTEVDGRVYRWNLSPIMVEGQIISIITQGQDITTIAEAEKQSQAARREAEESARVR
AEFLAKMSHELRTPLNGVLGVSQLLKRTPLNDEQREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRLKELVC
AIDRIYRPLCNEKGLELVVNSNITTAAIVRSDQIRINQILFNLLNNAIKFTHQGSIRVELQLIEGDPLAQLVIQVVDTGI
GIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYGIGTRFEIQLPIELVEKPDAPQQLLPAP
DPQPLFDKTLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKIHDYDLVLMDNQLPYLDGVETTRTIKKVLH
LPVVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKALEHFKHHHGQKNAGLN

Nucleotide

• Length: 2574 bp

>NTDB_id=896458 R4540_RS16885 WP_001026312.1 661102..663675(-) (luxQ) [Vibrio cholerae V52]
TTGAACATTCGACCTAGCCAAATCAAGCATAAACAGCGCATCGCTTCATTTATCACCCATGCTGTCGTGGTGGTGATGGG
CGTTCTGATCGTCAGTGTATTATTCCAAAGTTACCAGATCAGTAGCCGCTTGATGTCTCAAGAAGGGCAACGCACCTCAG
TTCAAACCTCCAGCTTGATTCAAAGTTTGTTTGATTTTCGTCTTGCGGCACTGCGAATTCACCAGGACAGCACAGCCAAG
AACGCCAGTTTAATCAACGCACTTGTCAGCCGAGATTCGAGTCGGCTGGATGAATTCTTTTCGAGTGTCGATGAACTTGA
ACTTTCTAATGCGCCAGATCTGCGTTTTATCTCCAGTCACGACAACATCTTGTGGGATGATGGCAACGCCTCTTTTTACG
GCATTGCCCAGCAAGAGCTGAATAAGCTTATCCGCAGAGTGGCGATCAGTGGCAATTGGCACTTGGTTCAAACGCCCAGC
GAGGGAAAATCAGTCCATATTTTGATGCGTCGTTCATCACTGATTGAAGCGGGAACCGGGCAGGTTGTTGGGTATCTGTA
TGTAGGCATCGTACTCAATGATAACTTTGCGCTGTTGGAAAATATCCGCAGTGGCAGTAACTCAGAAAACCTAGTCCTTG
CCGTCGATACTACGCCGCTGGTTTCTACCTTGAAAGGCAATGAACCTTATTCGCTGGACTATGTGGTGCACAGCGCCAAA
GATGCTATGCGCGACAGCTTTATTGTTGGGCAAACCTTCTTAGAAGTGGAAAGTGTACCGACCTATCTGTGCGTCTACTC
GATTCAGACCAACCAAAATGTGCTCACCCTGCGGGATAATTTCTATTTTTGGATGGCGTTTGCGCTGATCAGTATGATCG
GTGTTTCCATCGCGTCACGCTGGTGGCTACAAAAACGCATTCAGCGTGAAATTGAAACCTTGATGAATTACACCCATAAA
TTGATGGATCTGGATACGAAAAGTGAGTTTATCGGTTCAAAAATTTATGAGTTCGACTATTTTGGGCGAACGTTGGAACA
ATCATTCCGTCGTCTCGCCAATAAAGAAAAGCAGTTTGAAGATCTGTTTAACTTTGCGCTCTCACCGACCATGCTTTGGA
ATACCTCTGGTCGGCTGATCCGCATGAACCCCTCAGCGCAAATCCAGTTTTTGCGCGAAGATGCGCAAAACCATTTCTTA
TTTGAGATTCTTGAACGCCAACTGTTGCCGACCATCACTAAGGCGGCACAGGGCGATAATCCGAGTGACGTCACAACCGA
AGTGGATGGTCGTGTGTACCGCTGGAACCTTTCGCCGATCATGGTGGAAGGGCAGATCATTTCCATCATTACTCAGGGGC
AAGATATCACCACCATCGCGGAAGCGGAGAAACAAAGCCAAGCCGCAAGGCGCGAAGCGGAAGAGTCGGCACGGGTCAGA
GCCGAGTTTTTGGCCAAAATGAGTCACGAATTGCGCACGCCGCTCAATGGTGTGCTCGGTGTTTCCCAACTGCTAAAACG
GACCCCACTCAATGATGAACAGCGCGAACACGTGGCTGTGTTATGCAGCAGTGGTGAACATTTGCTCGCGGTGCTGAATG
ACATCTTGGATTTTTCACGCTTAGAGCAGGGCAAATTCCGTATTCAAAAGAATGAGTTTCGCCTTAAAGAGTTGGTGTGC
GCGATTGACCGCATTTATCGACCTTTATGTAATGAAAAAGGCTTGGAACTGGTGGTGAATTCCAATATCACCACCGCAGC
GATTGTGCGCAGCGATCAGATCCGGATTAACCAAATCTTGTTCAATTTGCTCAATAACGCGATCAAGTTTACTCACCAAG
GTTCGATACGTGTCGAATTGCAATTAATTGAAGGCGATCCGTTAGCTCAACTGGTGATTCAAGTCGTCGATACGGGGATT
GGTATCCGCGAACAAGATTTAACGGTGATTTTTGAACCTTTCATGCAAGCTGAATCGACCACCACTCGAGAGTACGGCGG
AAGTGGTTTAGGCTTAACGATTGTGCACAGCTTAGTGGAAATGCTCAGTGGTCAACTGCACGTCAGCTCCGAGTATGGCA
TTGGTACACGTTTTGAAATTCAGTTACCGATTGAGCTGGTAGAAAAACCGGATGCGCCGCAGCAGTTGTTACCAGCTCCT
GATCCTCAACCGTTATTTGATAAAACTCTGCGTGTACTGTTGGTGGAGGATAACCACACCAATGCCTTTATTGCTCAAGC
ATTCTGTCGTAAATATGGCTTAGATGTGAGTTGGGTAACCGATGGACTACAGGCGATTGAAGAGCTCAAAATACATGACT
ACGACTTAGTGCTGATGGATAACCAGTTACCCTATTTGGATGGCGTTGAGACCACGCGCACCATCAAAAAGGTGCTGCAT
CTTCCGGTGGTGGTGTATGCCTGTACTGCGGATGGCTTAGAAGAAACACGGCAAGCATTTTTCCATGCGGGCGCGGAATA
TGTGTTAGTGAAGCCACTGAAAGAGCAGACTTTGCATAAAGCGCTGGAGCATTTCAAACATCATCATGGCCAAAAAAACG
CTGGCTTAAATTGA

Domains

Predicted by InterproScan.

• LuxQ, periplasmic (LuxQ-periplasm) (41-277)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (592-705)

• Response regulator receiver domain (Response_reg) (732-842)

• His Kinase A (phospho-acceptor) domain (HisKA) (480-544)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxQ	Vibrio cholerae strain A1552	99.65	100	0.997