Detailed information NTG0895894

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: ABC965_RS03935
• Genome accession: NZ_CP155063
• Coordinates: 827377..828459 (+)
• Length: 360 a.a.
• NCBI ID: WP_025174683.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain CC130-MRSA-XI
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 822377..833459

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABC965_RS03915 (ABC965_03915)	-	822761..823831 (-)	1071	WP_000460983.1	GGDEF domain-containing protein	-
ABC965_RS03920 (ABC965_03920)	-	824149..825204 (+)	1056	WP_000258152.1	MraY family glycosyltransferase	-
ABC965_RS03925 (ABC965_03925)	-	825376..826017 (-)	642	WP_000192947.1	YigZ family protein	-
ABC965_RS03930 (ABC965_03930)	fakB1	826161..826988 (+)	828	WP_345852514.1	fatty acid kinase binding subunit FakB1	-
ABC965_RS03935 (ABC965_03935)	comFA	827377..828459 (+)	1083	WP_025174683.1	DEAD/DEAH box helicase	Machinery gene
ABC965_RS03940 (ABC965_03940)	-	828452..829126 (+)	675	WP_001057971.1	ComF family protein	-
ABC965_RS03945 (ABC965_03945)	raiA	829187..829759 (+)	573	WP_000617735.1	ribosome-associated translation inhibitor RaiA	-
ABC965_RS03950 (ABC965_03950)	secA	830173..832704 (+)	2532	WP_000506531.1	preprotein translocase subunit SecA	-
ABC965_RS03955 (ABC965_03955)	-	832746..832844 (+)	99	Protein_767	hypothetical protein	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 41996.54 Da
• Isoelectric Point: 9.7563

>NTDB_id=895894 ABC965_RS03935 WP_025174683.1 827377..828459(+) (comFA) [Staphylococcus aureus strain CC130-MRSA-XI]
MDNVTRYKITESSQSASQAYYHLSFELSEQQSYASEHIVRAIRMRQTILLYAVTGAGKTEMMFQGIQYARRQGDNIAIVS
PRVDVVVEISKRIKDAFLNEDIDILHQQSSQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKSLQQALKSSSK
VEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNNKIQKMLYRILQDQINKQRYTLVFFNNIEAM
IKTFSVYKHKITKLTYVHSEDVFRFEKVEQLRNGHFDVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKL
ECPTGKVLFFHEGVSMNMIQAKKEIQKMNKLALKRGWIDE

Nucleotide

• Length: 1083 bp

>NTDB_id=895894 ABC965_RS03935 WP_025174683.1 827377..828459(+) (comFA) [Staphylococcus aureus strain CC130-MRSA-XI]
ATGGATAATGTAACAAGATATAAAATAACAGAGAGTTCGCAAAGTGCATCACAAGCATATTATCATCTCTCATTTGAATT
GTCGGAACAGCAGTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAATGAGACAAACGATTTTGTTATATGCAGTAA
CAGGTGCAGGTAAGACAGAAATGATGTTTCAAGGCATTCAATATGCAAGACGACAGGGAGATAATATAGCTATTGTGTCA
CCACGTGTAGATGTTGTTGTAGAAATTAGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCA
GCAATCAAGTCAACAATTTGAAGGGCATTTTGTTGTATGCACAGTGCATCAACTTTACCGATTCAAACAGCACTTTGATA
CTATTTTTATTGATGAAGTCGATGCCTTTCCTTTATCAATGGATAAAAGTTTACAACAAGCATTGAAGTCATCTTCTAAA
GTTGAACATGCAACGATTTATATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATATAATTAA
ATTGCCAGCTCGCTTTCATAAAAAATCACTTCCAGTTCCTAAATATCGCTATTTCAAACTTAATAATAATAAGATTCAGA
AAATGTTATATCGAATTTTACAAGATCAAATTAATAAACAACGTTATACACTGGTGTTTTTTAACAATATAGAAGCAATG
ATTAAAACATTTTCGGTTTATAAGCATAAAATTACTAAATTAACATATGTCCATAGCGAGGATGTTTTTCGCTTTGAAAA
AGTTGAACAATTAAGGAATGGACATTTCGATGTCATTTTTACTACAACAATATTAGAACGTGGATTTACAATGGCAAATT
TGGATGTTGTTGTTATCGATGCACATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGTCGAAAATTA
GAATGTCCTACTGGAAAAGTATTGTTTTTTCATGAAGGAGTAAGTATGAATATGATTCAAGCAAAAAAAGAGATTCAAAA
GATGAACAAATTAGCATTAAAAAGAGGTTGGATTGATGAATAA

Domains

Predicted by InterProScan.

• Type III restriction enzyme, res subunit (ResIII) (25-173)

• Helicase conserved C-terminal domain (Helicase_C) (214-318)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	38.938	94.167	0.367
comFA/cflA	Streptococcus mitis SK321	37.356	96.667	0.361