Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   R4715_RS07205 Genome accession   NZ_CP137108
Coordinates   1408084..1408704 (+) Length   206 a.a.
NCBI ID   WP_000839909.1    Uniprot ID   A0A098Z2X2
Organism   Streptococcus pneumoniae strain OXT     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1403084..1413704
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R4715_RS07175 - 1403866..1404018 (-) 153 WP_000879507.1 hypothetical protein -
  R4715_RS07180 - 1404021..1405406 (-) 1386 WP_000813494.1 FtsK/SpoIIIE domain-containing protein -
  R4715_RS07185 - 1405435..1405821 (-) 387 WP_000985015.1 YdcP family protein -
  R4715_RS07190 - 1405837..1406151 (-) 315 WP_000420682.1 YdcP family protein -
  R4715_RS07195 - 1406553..1406723 (-) 171 WP_001227863.1 PhrA family quorum-sensing system peptide -
  R4715_RS07200 - 1406915..1407778 (+) 864 WP_001093609.1 helix-turn-helix domain-containing protein -
  R4715_RS07205 comM 1408084..1408704 (+) 621 WP_000839909.1 hypothetical protein Regulator
  R4715_RS07210 tsaE 1408790..1409233 (+) 444 WP_000288230.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  R4715_RS07215 - 1409223..1409741 (+) 519 WP_000455536.1 GNAT family N-acetyltransferase -
  R4715_RS07220 brpA 1409749..1410765 (+) 1017 WP_000239278.1 biofilm formation/cell division transcriptional regulator BrpA -
  R4715_RS07225 cinA 1410850..1412106 (+) 1257 WP_000642704.1 competence/damage-inducible protein A Machinery gene
  R4715_RS07230 recA 1412161..1413327 (+) 1167 WP_001085462.1 recombinase RecA Machinery gene

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23540.66 Da        Isoelectric Point: 10.1254

>NTDB_id=895727 R4715_RS07205 WP_000839909.1 1408084..1408704(+) (comM) [Streptococcus pneumoniae strain OXT]
MKSMRILFLLALIQISLSSCFLWKECILSFKQSTAFFIGSMVFVSGICAGVNYLYTRKQEVHSVLASKKSVKLFYSMLLL
INLLGAVLVLSDNLFIKNTLQQELVDFLLPSFFFLFGLDLLIFLPLKKYVRDFLAMLDRKKTVLVTILATLLFLRNPMTI
VSLLIYTGLGLFFAAYLVPNSVKKEVSFYGHIFRDLVLVIVTLIFF

Nucleotide


Download         Length: 621 bp        

>NTDB_id=895727 R4715_RS07205 WP_000839909.1 1408084..1408704(+) (comM) [Streptococcus pneumoniae strain OXT]
ATGAAATCAATGAGAATCTTATTTTTGTTAGCTTTAATTCAAATCAGTTTGAGTAGCTGTTTCCTATGGAAGGAATGCAT
CTTGTCCTTTAAACAAAGTACAGCTTTTTTCATCGGAAGCATGGTTTTCGTTTCAGGAATCTGTGCTGGAGTAAATTATC
TTTATACCCGTAAGCAAGAAGTCCATAGTGTCCTAGCCAGTAAGAAGTCGGTGAAGCTTTTTTACAGTATGTTACTCTTA
ATTAATTTGTTAGGAGCTGTTCTTGTTTTGTCAGATAACTTGTTCATCAAAAATACGCTGCAGCAAGAATTAGTTGACTT
TTTATTGCCATCCTTCTTTTTCCTATTTGGGCTAGATTTGCTGATTTTTTTACCCTTGAAAAAATACGTGCGCGATTTTC
TTGCTATGCTAGACAGAAAAAAGACAGTGTTGGTGACTATTTTAGCAACACTTCTTTTCTTAAGAAATCCAATGACCATT
GTCTCACTTCTGATTTATACTGGACTGGGCTTGTTTTTTGCAGCCTATCTTGTCCCAAATTCGGTTAAGAAGGAAGTTTC
CTTTTATGGTCATATTTTCCGAGATCTTGTATTGGTCATTGTTACGCTCATTTTCTTTTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A098Z2X2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

99.515

100

0.995
  comM Streptococcus pneumoniae R6

99.515

100

0.995
  comM Streptococcus pneumoniae TIGR4

99.515

100

0.995
  comM Streptococcus mitis NCTC 12261

38.462

94.66

0.364
  comM Streptococcus mitis SK321

38.462

94.66

0.364