Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   AAHT64_RS04290 Genome accession   NZ_CP155054
Coordinates   851104..851964 (+) Length   286 a.a.
NCBI ID   WP_029318489.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain R38     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 846104..856964
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAHT64_RS04260 (AAHT64_04260) pncA 846569..847120 (+) 552 WP_014477836.1 isochorismatase family cysteine hydrolase -
  AAHT64_RS04265 (AAHT64_04265) pncB 847136..848608 (+) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  AAHT64_RS04270 (AAHT64_04270) pdeH 848745..849974 (+) 1230 WP_003228790.1 cyclic di-GMP phosphodiesterase -
  AAHT64_RS04275 (AAHT64_04275) - 849950..850318 (-) 369 WP_014477834.1 hypothetical protein -
  AAHT64_RS04280 (AAHT64_04280) - 850432..850557 (-) 126 WP_003228793.1 hypothetical protein -
  AAHT64_RS04285 (AAHT64_04285) degQ 850779..850919 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  AAHT64_RS04290 (AAHT64_04290) comQ 851104..851964 (+) 861 WP_029318489.1 polyprenyl synthetase family protein Regulator
  AAHT64_RS04295 (AAHT64_04295) comX 851979..852140 (+) 162 WP_003228803.1 competence pheromone ComX -
  AAHT64_RS04300 (AAHT64_04300) comP 852148..854445 (+) 2298 WP_032730345.1 histidine kinase Regulator
  AAHT64_RS04305 (AAHT64_04305) comA 854526..855170 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  AAHT64_RS04310 (AAHT64_04310) yuxO 855189..855569 (+) 381 WP_003228810.1 hotdog fold thioesterase -
  AAHT64_RS04315 (AAHT64_04315) mnhG 855608..855982 (-) 375 WP_003228812.1 monovalent cation/H(+) antiporter subunit G -
  AAHT64_RS04320 (AAHT64_04320) mrpF 855966..856250 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  AAHT64_RS04325 (AAHT64_04325) mrpE 856250..856726 (-) 477 WP_003228815.1 Na+/H+ antiporter subunit E -

Sequence


Protein


Download         Length: 286 a.a.        Molecular weight: 32481.42 Da        Isoelectric Point: 4.6838

>NTDB_id=895481 AAHT64_RS04290 WP_029318489.1 851104..851964(+) (comQ) [Bacillus subtilis subsp. subtilis strain R38]
MKEIVSQKIMNQDLERYLQNFIESKDTFEFADLALHHYLAFNGQDQKAIELLAAGIELLILSFDIYDDLEDQDNGSAVWM
KIDSSIALNAVTALYTLSIQVMCQASHEPEFSQEILNFALQSIQGQHDDIVNAPQTEEACLEMIKNKSGALTALPCVMGV
MLATGKYHPIVASYSYELGIIAQIENDYKGLFYLNNDFVQKKNTLAYLYLKKQFNDASAELLSLYQKPEEFVSINTKALK
RKLTEAGVIQYLLVMKHLSLQKIKNEMSQLKLEEDKTEKLLSVMIK

Nucleotide


Download         Length: 861 bp        

>NTDB_id=895481 AAHT64_RS04290 WP_029318489.1 851104..851964(+) (comQ) [Bacillus subtilis subsp. subtilis strain R38]
ATGAAGGAGATTGTAAGCCAAAAAATAATGAATCAGGACTTGGAACGATATCTTCAGAATTTTATTGAGTCTAAGGATAC
GTTTGAGTTTGCCGATTTGGCTCTTCATCATTATTTAGCTTTTAACGGTCAGGACCAAAAAGCAATCGAATTGCTAGCTG
CCGGAATTGAATTGCTTATACTCTCATTCGATATTTATGATGACTTAGAGGATCAAGATAATGGAAGTGCTGTCTGGATG
AAGATTGACTCGTCAATCGCTTTAAATGCAGTTACAGCTCTTTACACCCTAAGTATACAAGTGATGTGTCAAGCTAGTCA
TGAACCAGAATTTTCACAAGAGATATTGAATTTTGCGTTACAATCAATTCAAGGCCAGCATGATGATATTGTGAATGCGC
CGCAAACTGAAGAAGCCTGTCTTGAAATGATCAAAAATAAATCAGGAGCGCTAACGGCATTGCCCTGTGTAATGGGAGTA
ATGCTGGCAACAGGCAAATACCATCCCATTGTAGCTTCTTATTCTTATGAACTTGGGATTATTGCACAAATCGAAAATGA
TTATAAAGGTTTGTTTTACTTAAATAACGATTTTGTTCAGAAAAAAAATACATTGGCATACTTATACTTAAAGAAACAAT
TTAACGATGCTTCAGCGGAGCTACTAAGTTTATATCAAAAACCAGAGGAATTTGTTTCTATTAATACTAAGGCTTTGAAG
CGAAAATTGACAGAAGCAGGCGTTATACAATATTTACTGGTGATGAAACATTTATCTCTCCAAAAAATAAAAAATGAAAT
GTCACAATTAAAACTAGAAGAAGATAAAACTGAAAAATTATTGTCTGTTATGATTAAATAA

Domains


Predicted by InterProScan.

(39-229)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45.196

98.252

0.444