Detailed information NTG0895416

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: R4708_RS06855
• Genome accession: NZ_CP137104
• Coordinates: 1340465..1341475 (+)
• Length: 336 a.a.
• NCBI ID: WP_000990606.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain LM
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1335465..1346475

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4708_RS06825	-	1336335..1336541 (+)	207	WP_000503440.1	hypothetical protein	-
R4708_RS06830	-	1336538..1336732 (+)	195	WP_000820180.1	hypothetical protein	-
R4708_RS06835	-	1336719..1337603 (+)	885	WP_000219356.1	ABC transporter ATP-binding protein	-
R4708_RS06840	-	1337605..1338342 (+)	738	WP_000832841.1	ABC transporter permease	-
R4708_RS06845	-	1338342..1339439 (+)	1098	WP_000893547.1	sensor histidine kinase	-
R4708_RS06850	-	1339441..1340040 (+)	600	WP_000866725.1	response regulator transcription factor	-
R4708_RS06855	ccpA	1340465..1341475 (+)	1011	WP_000990606.1	catabolite control protein A	Regulator
R4708_RS06860	-	1341539..1341787 (+)	249	WP_001092040.1	hypothetical protein	-
R4708_RS06865	-	1341816..1342778 (-)	963	WP_001124773.1	asparaginase	-
R4708_RS06870	-	1342844..1344232 (+)	1389	WP_000453140.1	Cof-type HAD-IIB family hydrolase	-
R4708_RS06875	-	1344267..1344719 (-)	453	WP_000079148.1	universal stress protein	-
R4708_RS06880	-	1344881..1345173 (+)	293	Protein_1333	hypothetical protein	-

Sequence

Protein

• Length: 336 a.a.
• Molecular weight: 37042.99 Da
• Isoelectric Point: 5.3212

>NTDB_id=895416 R4708_RS06855 WP_000990606.1 1340465..1341475(+) (ccpA) [Streptococcus pneumoniae strain LM]
MNADDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNGYFS
SLAKGIDDIAEMYKYNIVLANSDEDNEKEVSVVNTLFSKQVDGIIYMGYHLTDKIRSEFSRSRTPIVLAGTVDVEHQLPS
VNIDYKQATIDAVSYLAKENERIAFVSGPLVDDINGKVRLVGYKETLKKAGIAYSEGLVFESKYSYDDGYALAERLISSN
ATAAVVTGDELAAGVLNGLADKGVSVPEDFEIITSDDSQISRFTRPNLTTIAQPLYDLGAISMRMLTKIMHKEELEEREV
LLPHGLTERSSTRKRK

Nucleotide

• Length: 1011 bp

>NTDB_id=895416 R4708_RS06855 WP_000990606.1 1340465..1341475(+) (ccpA) [Streptococcus pneumoniae strain LM]
ATGAATGCAGATGATACAGTAACCATTTATGATGTCGCTCGTGAAGCAGGTGTTTCCATGGCGACGGTCAGCCGTGTGGT
CAATGGCAATAAAAATGTAAAAGAGAATACCCGTAAAAAAGTGCTAGAGGTAATTGATCGCTTGGATTATCGTCCAAATG
CAGTTGCGCGTGGTCTTGCAAGTAAAAAGACAACCACTGTCGGTGTCGTGATTCCAAATATTACCAATGGTTATTTTTCG
AGTTTGGCTAAGGGGATTGATGATATTGCAGAAATGTACAAGTACAATATTGTCCTAGCTAATAGCGATGAAGATAACGA
GAAAGAAGTTTCTGTTGTCAATACCCTCTTTTCAAAGCAGGTAGATGGCATTATCTATATGGGTTATCACTTGACAGATA
AAATTCGCTCAGAATTTTCGCGTTCACGTACTCCGATTGTTCTCGCAGGAACTGTCGATGTTGAGCACCAGTTGCCAAGT
GTCAATATTGACTATAAGCAAGCAACAATTGATGCAGTGAGTTACCTTGCTAAAGAAAATGAGCGTATTGCTTTCGTTAG
CGGTCCGCTAGTGGATGACATCAATGGTAAGGTTCGTTTAGTTGGCTACAAGGAAACCTTGAAAAAAGCAGGAATCGCTT
ATAGTGAGGGTTTGGTATTTGAATCTAAATATAGCTATGATGATGGTTACGCCTTAGCAGAGCGTTTGATTTCATCAAAT
GCAACTGCAGCAGTTGTGACAGGTGATGAGTTGGCAGCAGGAGTCTTGAACGGTTTGGCTGATAAGGGTGTTTCTGTGCC
AGAAGATTTTGAAATTATTACTAGTGATGATTCACAAATCTCACGCTTTACCCGTCCAAACTTGACAACGATTGCCCAAC
CTCTTTATGACCTTGGTGCCATTAGTATGCGTATGTTGACCAAGATTATGCATAAGGAAGAGTTGGAAGAACGTGAAGTT
CTCTTACCTCATGGTTTGACAGAACGTAGCTCAACACGAAAACGTAAATAG

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (181-332)

• Bacterial regulatory proteins, lacI family (LacI) (8-53)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	99.405	100	0.994
ccpA	Streptococcus gordonii str. Challis substr. CH1	87.126	99.405	0.866
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	57.704	98.512	0.568