Detailed information NTG0895053

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: R4714_RS09020
• Genome accession: NZ_CP137099
• Coordinates: 1716088..1716678 (+)
• Length: 196 a.a.
• NCBI ID: WP_000613477.1
• Uniprot ID: A0A064BX72
• Organism: Streptococcus pneumoniae strain 20824-4
• Function: degradation of ComX; degradation of ComW (predicted from homology) Competence regulation

Genomic Context

Location: 1711088..1721678

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R4714_RS08990	-	1711474..1711929 (-)	456	WP_001812922.1	8-oxo-dGTP diphosphatase	-
R4714_RS08995	-	1711949..1713124 (-)	1176	WP_000680062.1	NAD(P)/FAD-dependent oxidoreductase	-
R4714_RS09000	-	1713183..1714028 (-)	846	WP_000219933.1	DegV family protein	-
R4714_RS09005	-	1714153..1714710 (+)	558	WP_000004139.1	TetR/AcrR family transcriptional regulator	-
R4714_RS09010	-	1714729..1715196 (+)	468	WP_000136976.1	cytidine/deoxycytidylate deaminase family protein	-
R4714_RS09015	upp	1715285..1715914 (+)	630	WP_000515974.1	uracil phosphoribosyltransferase	-
R4714_RS09020	clpP	1716088..1716678 (+)	591	WP_000613477.1	ATP-dependent Clp protease proteolytic subunit ClpP	Regulator
R4714_RS09025	-	1716757..1717005 (+)	249	WP_000462126.1	YlbG family protein	-
R4714_RS09030	-	1717106..1718266 (+)	1161	WP_000726149.1	ABC transporter substrate-binding protein	-
R4714_RS09035	-	1718534..1719403 (+)	870	WP_000941431.1	branched-chain amino acid ABC transporter permease	-
R4714_RS09040	-	1719407..1720363 (+)	957	WP_000662293.1	branched-chain amino acid ABC transporter permease	-
R4714_RS09045	-	1720363..1721127 (+)	765	WP_001186008.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 196 a.a.
• Molecular weight: 21358.36 Da
• Isoelectric Point: 4.4910

>NTDB_id=895053 R4714_RS09020 WP_000613477.1 1716088..1716678(+) (clpP) [Streptococcus pneumoniae strain 20824-4]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQ
SMEKVHADAERDNWMSAQETLEYGFIDEIMANNSLN

Nucleotide

• Length: 591 bp

>NTDB_id=895053 R4714_RS09020 WP_000613477.1 1716088..1716678(+) (clpP) [Streptococcus pneumoniae strain 20824-4]
ATGATTCCTGTAGTTATTGAACAAACAAGCCGTGGAGAACGTTCTTACGATATTTACTCACGTCTTCTCAAAGACCGCAT
CATTATGCTGACAGGTCCGGTTGAAGACAATATGGCTAACTCTGTTATTGCCCAATTGCTTTTCTTGGATGCCCAAGATA
GTACAAAAGATATTTACCTTTATGTCAATACACCAGGTGGTTCTGTTTCAGCTGGTTTGGCAATCGTAGATACCATGAAC
TTTATCAAGGCAGATGTCCAAACCATTGTTATGGGAATGGCTGCATCTATGGGAACAGTCATCGCATCAAGTGGAGCAAA
AGGCAAACGTTTCATGCTTCCAAATGCTGAATACATGATTCACCAACCAATGGGCGGTACAGGTGGTGGTACCCAACAAA
CTGATATGGCTATCGCTGCAGAACACTTGCTCAAAACTCGTAATACCTTGGAAAAAATCTTGGCTGAAAATTCAGGTCAG
TCAATGGAAAAAGTCCATGCAGATGCAGAACGTGATAACTGGATGAGCGCCCAGGAAACACTTGAATATGGCTTTATTGA
TGAAATTATGGCCAACAATTCATTGAACTAA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (11-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Streptococcus pneumoniae Rx1	100	100	1
clpP	Streptococcus pneumoniae D39	100	100	1
clpP	Streptococcus pneumoniae R6	100	100	1
clpP	Streptococcus pneumoniae TIGR4	100	100	1
clpP	Streptococcus thermophilus LMG 18311	92.821	99.49	0.923
clpP	Streptococcus thermophilus LMD-9	92.821	99.49	0.923
clpP	Streptococcus pyogenes JRS4	90.769	99.49	0.903
clpP	Streptococcus pyogenes MGAS315	90.769	99.49	0.903
clpP	Streptococcus mutans UA159	85.714	100	0.857
clpP	Lactococcus lactis subsp. lactis strain DGCC12653	85.128	99.49	0.847
clpP	Lactococcus lactis subsp. cremoris KW2	84.615	99.49	0.842
clpP	Bacillus subtilis subsp. subtilis str. 168	58.854	97.959	0.577
clpP	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.031	98.469	0.571