Detailed information NTG0894906

Bioinformatically predicted

Overview

• Name: uvrC
• Type: Machinery gene
• Locus tag: AAYR29_RS01550
• Genome accession: NZ_CP154918
• Coordinates: 262712..264484 (+)
• Length: 590 a.a.
• NCBI ID: WP_038828019.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain FUA2231
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 257712..269484

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAYR29_RS01530 (AAYR29_01530)	etfB	258447..259220 (+)	774	WP_014480500.1	electron transfer flavoprotein subunit beta	-
AAYR29_RS01535 (AAYR29_01535)	etfA	259256..260233 (+)	978	WP_004398999.1	electron transfer flavoprotein subunit alpha	-
AAYR29_RS01540 (AAYR29_01540)	abfB	260452..261939 (+)	1488	WP_088327483.1	alpha-L-arabinofuranosidase AbfB	-
AAYR29_RS01545 (AAYR29_01545)	trxA	262262..262576 (+)	315	WP_003222500.1	thioredoxin	-
AAYR29_RS01550 (AAYR29_01550)	uvrC	262712..264484 (+)	1773	WP_038828019.1	excinuclease ABC subunit UvrC	Machinery gene
AAYR29_RS01555 (AAYR29_01555)	-	264854..266080 (+)	1227	WP_024572581.1	aspartate kinase	-
AAYR29_RS01560 (AAYR29_01560)	yslB	266124..266570 (-)	447	WP_003222508.1	YslB family protein	-
AAYR29_RS01565 (AAYR29_01565)	sdhC	266863..267471 (+)	609	WP_003222512.1	succinate dehydrogenase cytochrome B558	-
AAYR29_RS01570 (AAYR29_01570)	sdhA	267505..269265 (+)	1761	WP_003229567.1	succinate dehydrogenase flavoprotein subunit	-

Sequence

Protein

• Length: 590 a.a.
• Molecular weight: 68500.32 Da
• Isoelectric Point: 9.4732

>NTDB_id=894906 AAYR29_RS01550 WP_038828019.1 262712..264484(+) (uvrC) [Bacillus subtilis strain FUA2231]
MNKQLKEKLALLPDQPGCYLMKDRQQTVIYVGKAKVLKNRVRSYFTGSHDAKTQRLVTEIEDFEYIVTSSNLEALILEMN
LIKKHDPKYNVMLKDDKTYPFIKLTHERHPRLIVTRNVKKDKGRYFGPYPNVQAARETKKLLDRLYPLRKCSKLPDRVCL
YYHLGQCLAPCVKDISEETNRELVESITRFLRGGYNEVKKELEEKMHEAAENLEFERAKELRDQIAHIESTMEKQKMTMN
DLVDRDVFAYAYDKGWMCVQVFFIRQGKLIERDVSMFPLYQEADEEFLTFIGQFYSKNNHFLPKEILVPDSVDQSMIEQL
LETNVHQPKKGPKKELLMLAHKNAKIALKEKFSLIERDEERSIGAVQKLGEALNIYTPHRIEAFDNSNIQGTNPVSAMIV
FIDGKPYKKEYRKYKIKTVTGPDDYGSMREVVRRRYTRVLRENLPLPDLIIIDGGKGQINAARDVIENELGLDIPIAGLA
KDEKHRTSNLLIGEPLEVVYLERNSQEFYLLQRIQDEVHRFAISFHRQIRGKSAFQSVLDDIPGIGEKRKKMLLKHFGSV
KKMKEASLEDIKKAGVPAAAAQLLYDKLQK

Nucleotide

• Length: 1773 bp

>NTDB_id=894906 AAYR29_RS01550 WP_038828019.1 262712..264484(+) (uvrC) [Bacillus subtilis strain FUA2231]
ATGAACAAACAACTGAAAGAAAAACTCGCCCTCCTTCCTGATCAACCGGGTTGTTATCTCATGAAGGACCGGCAGCAGAC
TGTGATCTACGTAGGGAAAGCGAAAGTGCTGAAAAACAGAGTGCGCTCCTACTTCACCGGTTCTCACGACGCGAAAACCC
AAAGGCTTGTGACGGAAATCGAGGATTTTGAATATATCGTGACGTCCTCCAATCTTGAAGCGCTTATTTTAGAAATGAAT
CTGATCAAAAAGCATGATCCGAAATACAACGTCATGCTCAAAGACGACAAAACCTATCCTTTCATAAAACTCACCCATGA
ACGCCACCCAAGGCTGATTGTCACCCGCAATGTCAAAAAAGACAAAGGGCGCTATTTCGGGCCGTATCCGAATGTACAGG
CAGCAAGGGAAACAAAAAAACTGCTCGACCGTCTGTATCCTCTCAGAAAATGCTCCAAGCTCCCGGACAGAGTGTGCCTT
TACTATCATCTGGGCCAATGCCTCGCTCCGTGTGTAAAGGATATTTCCGAAGAGACGAACAGAGAGCTGGTTGAAAGCAT
TACACGTTTCTTAAGGGGCGGCTATAATGAGGTCAAAAAAGAGCTTGAAGAGAAAATGCATGAAGCTGCTGAGAATCTTG
AGTTTGAACGAGCAAAAGAGCTTCGTGACCAAATTGCCCATATTGAATCAACGATGGAAAAACAAAAAATGACGATGAAC
GATCTAGTCGACCGTGATGTATTCGCGTACGCGTACGATAAGGGCTGGATGTGCGTGCAGGTTTTTTTCATCCGCCAAGG
AAAGCTCATTGAACGCGATGTCAGCATGTTCCCGCTTTATCAGGAAGCAGATGAAGAGTTCCTCACGTTCATCGGGCAGT
TCTATTCAAAAAACAACCACTTCCTTCCGAAGGAGATTTTAGTTCCAGACAGCGTAGATCAATCCATGATCGAGCAGCTG
CTGGAAACAAACGTTCACCAGCCGAAGAAAGGCCCGAAAAAAGAACTGCTCATGCTTGCCCATAAAAATGCGAAAATCGC
ATTGAAAGAAAAATTCTCTTTAATCGAACGCGACGAGGAGCGTTCAATCGGGGCTGTGCAGAAACTAGGTGAGGCATTAA
ATATTTATACGCCGCACAGAATTGAAGCGTTTGATAACTCAAACATACAGGGGACAAACCCGGTTTCCGCGATGATTGTG
TTTATCGACGGCAAACCATACAAAAAGGAATACCGCAAATATAAAATCAAAACCGTTACAGGGCCGGATGATTACGGTTC
TATGAGAGAAGTTGTCAGAAGACGCTATACGAGAGTGCTTCGTGAGAATCTGCCGCTGCCCGATCTGATTATCATTGACG
GAGGAAAAGGGCAGATCAACGCAGCAAGGGATGTCATTGAAAATGAACTCGGCTTGGATATTCCGATCGCCGGTTTAGCG
AAAGATGAAAAACACAGAACCTCAAATTTACTGATCGGTGAGCCGCTGGAGGTGGTGTATCTGGAACGAAACAGCCAGGA
ATTTTACCTCCTGCAGCGCATTCAGGACGAGGTGCACCGTTTTGCAATCAGTTTTCACAGGCAAATCCGGGGAAAAAGCG
CGTTTCAATCCGTTTTGGACGACATCCCGGGTATCGGAGAGAAAAGAAAGAAAATGCTGTTAAAGCATTTCGGTTCCGTT
AAAAAAATGAAGGAAGCAAGCCTTGAGGACATCAAAAAAGCCGGTGTTCCCGCAGCGGCGGCTCAGCTCCTTTACGACAA
ATTGCAAAAATAA

Domains

Predicted by InterProScan.

• UvrC RNAse H endonuclease domain (UvrC_RNaseH_dom) (373-523)

• GIY-YIG catalytic domain (GIY-YIG) (16-90)

• UvrB/uvrC motif (UVR) (197-229)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrC	Streptococcus pneumoniae TIGR4	59.184	99.661	0.59
uvrC	Streptococcus pneumoniae R6	58.844	99.661	0.586
uvrC	Streptococcus pneumoniae D39	58.844	99.661	0.586