Detailed information NTG0894592

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: R3L09_RS03080
• Genome accession: NZ_CP137064
• Coordinates: 552458..553516 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain SNUBHAB0292
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 547458..558516

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R3L09_RS03065 (R3L09_03070)	-	548563..548895 (+)	333	WP_000169594.1	hypothetical protein	-
R3L09_RS03070 (R3L09_03075)	-	548898..549722 (+)	825	WP_002019666.1	putative RNA methyltransferase	-
R3L09_RS03075 (R3L09_03080)	ponA	549740..552295 (-)	2556	WP_000736677.1	penicillin-binding protein PBP1a	-
R3L09_RS03080 (R3L09_03085)	pilM	552458..553516 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
R3L09_RS03085 (R3L09_03090)	pilN	553516..554157 (+)	642	WP_000201227.1	PilN domain-containing protein	Machinery gene
R3L09_RS03090 (R3L09_03095)	pilO	554154..554894 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
R3L09_RS03095 (R3L09_03100)	pilP	554905..555432 (+)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
R3L09_RS03100 (R3L09_03105)	pilQ	555500..557662 (+)	2163	WP_033503048.1	type IV pilus secretin PilQ family protein	Machinery gene
R3L09_RS03105 (R3L09_03110)	aroK	557674..558243 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=894592 R3L09_RS03080 WP_002014066.1 552458..553516(+) (pilM) [Acinetobacter baumannii strain SNUBHAB0292]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=894592 R3L09_RS03080 WP_002014066.1 552458..553516(+) (pilM) [Acinetobacter baumannii strain SNUBHAB0292]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCCGATCGTCTTG
CGAATCCAAATCGTGTAAATGTACTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTCTTTGGTGGCAAGCAACTTACGCTTGAAATTCAAAGTCGTTATGGCTTGTCTTTAGAAGAA
GCAAGCCGAGCGAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTAGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCCAAGCTTTTGCAGCAAAAATTAGGTTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423