Detailed information NTG0894559

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: AAVB98_RS12040
• Genome accession: NZ_CP154895
• Coordinates: 2301199..2304072 (+)
• Length: 957 a.a.
• NCBI ID: WP_013353756.1
• Uniprot ID: A0A9P1NIW4
• Organism: Bacillus amyloliquefaciens strain Fad 77
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2296199..2309072

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAVB98_RS12030 (AAVB98_12030)	-	2298794..2299030 (+)	237	WP_003151438.1	CsbA family protein	-
AAVB98_RS12035 (AAVB98_12035)	uvrB	2299206..2301191 (+)	1986	WP_013353757.1	excinuclease ABC subunit UvrB	Machinery gene
AAVB98_RS12040 (AAVB98_12040)	uvrA	2301199..2304072 (+)	2874	WP_013353756.1	excinuclease ABC subunit UvrA	Machinery gene
AAVB98_RS12045 (AAVB98_12045)	-	2304120..2304359 (-)	240	WP_014471080.1	hypothetical protein	-
AAVB98_RS12050 (AAVB98_12050)	-	2304557..2304883 (+)	327	WP_025649342.1	hypothetical protein	-
AAVB98_RS12055 (AAVB98_12055)	-	2304908..2306005 (+)	1098	WP_013353753.1	DUF4097 domain-containing protein	-
AAVB98_RS12060 (AAVB98_12060)	-	2306011..2306205 (+)	195	WP_003151448.1	PspC domain-containing protein	-
AAVB98_RS12065 (AAVB98_12065)	-	2306206..2306565 (+)	360	WP_013353752.1	phage holin family protein	-

Sequence

Protein

• Length: 957 a.a.
• Molecular weight: 106089.33 Da
• Isoelectric Point: 6.3466

>NTDB_id=894559 AAVB98_RS12040 WP_013353756.1 2301199..2304072(+) (uvrA) [Bacillus amyloliquefaciens strain Fad 77]
MAIDRIEVKGARAHNLKNIDVTIPRDQLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDAIEG
LSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARVGKPHCPEHGIEITSQTIEQMVDRILEYPERTKLQVLAPIISGR
KGAHVKVLDQIRKQGYVRVRIDGEMAELSDEIELEKNKKHSIEVVIDRIVVKEGVAARLSDSLETALRLGEGRVMIDVIG
QEELMFSEHHACPMCGFSIGELEPRLFSFNSPFGACPTCDGLGLKLEVDPELVIPNPELSLKEHAIAPWTPISSQYYPQL
LQAVCTHYGIDMETPVKDLPNHQLDKVLYGSGNERIYFKYENDFGQVRENEIEFEGVLRNIERRYKETSSDYIREQMEQY
MSQKPCPTCKGYRLKKEALAVLVNGRHIGTITELSVGDALEFFKNLTLSEKDMQIADLILREIVERLSFLDKVGLDYLTL
SRAAGTLSGGEAQRIRLATQIGSRLSGVLYILDEPSIGLHQRDNDRLISALKNMRDLGNTLIVVEHDEDTMMAADYLIDI
GPGAGIHGGRVISAGTPEEVMNDADSLTGRYLSGAQFIPMPPERRKPDGRFIEIKGASENNLKKANAKFPLGTFTAVTGV
SGSGKSTLVNEILHKALAQKLHKAKAKPGSHKEIKGLDHLDKVIDIDQAPIGRTPRSNPATYTGVFDDIRDVFAQTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVTYKGKSISDVLDMTVEDALSFFEN
IPKIKRKLQTLADVGLGYVTLGQPATTLSGGEAQRVKLASELHKRSTGRTLYILDEPTTGLHVDDIARLLVVLQRLVDNG
DTVLVIEHNLDIIKTADYIVDLGPEGGAGGGTIVASGTPEEVVEVKESYTGRYLKPVMERDKKRMKTLLAEKETAAT

Nucleotide

• Length: 2874 bp

>NTDB_id=894559 AAVB98_RS12040 WP_013353756.1 2301199..2304072(+) (uvrA) [Bacillus amyloliquefaciens strain Fad 77]
ATGGCAATTGACCGGATTGAGGTGAAAGGGGCAAGGGCGCATAATTTAAAAAACATTGATGTAACGATTCCGCGGGATCA
GCTCGTCGTCGTGACGGGTCTGTCCGGATCGGGAAAATCATCCCTTGCTTTTGACACCATTTACGCGGAAGGACAGAGGC
GGTATGTTGAATCGCTTTCCGCCTATGCGCGCCAATTTTTAGGGCAGATGGATAAGCCGGACGTTGATGCGATTGAAGGG
CTTTCTCCGGCCATCAGCATTGACCAGAAAACGACAAGCCGCAATCCGCGGTCAACCGTCGGAACGGTAACGGAGATTTA
TGATTATCTGCGGCTGTTATACGCGAGAGTCGGGAAGCCGCACTGCCCGGAGCACGGGATCGAAATTACGTCTCAAACGA
TTGAACAGATGGTTGACCGGATTCTTGAATATCCGGAGCGGACGAAGCTTCAAGTGCTTGCGCCGATTATCTCCGGCAGA
AAAGGCGCCCATGTCAAAGTGCTTGACCAAATCAGAAAGCAAGGTTACGTAAGAGTCCGGATTGACGGAGAAATGGCCGA
GCTTTCCGACGAGATCGAACTTGAAAAAAATAAAAAGCATTCCATTGAAGTAGTCATTGACCGGATTGTCGTCAAGGAAG
GTGTTGCCGCCCGGCTTTCCGACTCACTGGAAACCGCGCTCCGCTTAGGAGAAGGCCGAGTCATGATTGATGTCATCGGC
CAGGAAGAGCTGATGTTCAGCGAGCATCACGCCTGTCCGATGTGCGGTTTTTCAATCGGTGAGCTTGAGCCCCGGCTGTT
TTCGTTTAACAGCCCGTTCGGCGCCTGTCCGACTTGCGACGGTCTTGGCTTGAAGCTGGAAGTGGACCCTGAACTCGTCA
TTCCAAATCCTGAACTGTCATTAAAGGAACACGCCATCGCGCCGTGGACGCCGATCAGTTCACAATATTATCCGCAGCTG
CTTCAGGCGGTCTGCACTCATTACGGCATTGATATGGAGACTCCGGTCAAAGACCTGCCGAATCATCAGCTTGATAAAGT
GCTTTATGGCAGCGGCAATGAACGGATCTACTTTAAATACGAGAATGATTTCGGGCAAGTGCGGGAAAATGAAATTGAGT
TTGAAGGTGTGCTGCGCAATATTGAGAGACGGTATAAAGAGACAAGCTCCGATTATATCCGTGAACAGATGGAGCAGTAC
ATGTCACAGAAGCCGTGCCCGACGTGCAAAGGCTACCGGCTGAAGAAAGAAGCGCTGGCCGTTTTGGTCAACGGACGCCA
CATCGGAACCATTACCGAGCTTTCCGTCGGCGATGCGCTGGAATTTTTCAAAAACCTGACGCTGTCTGAGAAAGATATGC
AGATTGCCGATTTAATTTTAAGAGAAATTGTGGAGCGGCTCAGTTTCTTAGATAAAGTCGGTCTAGATTATCTGACGCTT
AGCCGGGCGGCAGGGACGCTGTCAGGCGGAGAAGCCCAGCGTATCAGGCTTGCGACGCAGATCGGCTCCCGTTTGTCAGG
CGTCCTGTACATTTTGGATGAGCCGTCCATCGGCCTTCACCAGCGTGACAATGACCGTCTGATCAGCGCGCTGAAAAACA
TGAGAGATCTCGGGAATACACTGATCGTCGTTGAGCATGATGAAGATACGATGATGGCTGCCGATTATTTGATAGACATC
GGCCCCGGCGCCGGCATTCACGGCGGCCGTGTCATATCCGCGGGCACGCCTGAAGAGGTGATGAATGATGCGGACTCTCT
GACCGGACGTTATTTATCAGGGGCTCAATTCATCCCGATGCCTCCGGAGAGAAGAAAGCCTGACGGCCGATTCATTGAAA
TTAAAGGCGCTTCAGAAAACAACCTGAAAAAAGCGAACGCCAAATTCCCGCTCGGCACTTTTACGGCGGTGACAGGTGTG
TCCGGTTCCGGAAAAAGCACGCTTGTGAACGAAATTCTGCATAAGGCGCTTGCGCAAAAACTTCATAAAGCCAAAGCGAA
ACCGGGAAGCCATAAAGAGATCAAAGGCCTCGATCATCTTGATAAGGTGATCGACATCGATCAGGCGCCGATCGGCCGGA
CACCGAGATCAAATCCGGCAACTTACACAGGCGTATTTGATGATATCCGCGATGTGTTCGCGCAGACAAATGAAGCGAAG
GTGCGCGGCTACAAAAAAGGCCGATTCAGCTTTAATGTAAAAGGCGGGCGCTGTGAAGCCTGCCGCGGCGACGGCATCAT
CAAAATTGAGATGCACTTTCTTCCCGACGTGTACGTCCCGTGCGAAGTGTGCCACGGCAAACGTTACAACCGGGAGACGC
TTGAGGTCACATACAAAGGAAAAAGCATTTCTGACGTTCTGGATATGACGGTGGAAGATGCTCTGTCTTTCTTTGAAAAT
ATCCCGAAAATCAAACGCAAGCTTCAAACGCTTGCCGATGTCGGACTCGGGTATGTGACGCTCGGCCAGCCGGCGACGAC
GCTGTCAGGCGGAGAAGCGCAGCGCGTGAAGCTTGCTTCCGAACTGCATAAGCGCTCCACCGGACGGACGCTGTATATTT
TGGACGAACCGACGACAGGCCTCCACGTCGATGATATCGCACGGCTTTTGGTCGTGCTTCAAAGACTCGTTGATAACGGG
GATACCGTTTTGGTCATTGAACACAATCTCGATATCATAAAAACGGCGGACTACATCGTAGATCTGGGACCTGAAGGCGG
CGCGGGCGGCGGCACGATCGTAGCCTCCGGGACACCTGAAGAAGTTGTTGAAGTGAAGGAATCATATACGGGCCGCTATC
TGAAACCGGTAATGGAACGTGATAAAAAACGGATGAAAACATTGCTGGCCGAAAAAGAAACGGCAGCCACGTAA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (622-858)

• UvrA interaction domain (UvrA_inter) (132-238)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-399)

3D structure

• AlphaFold DB: A0A9P1NIW4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	69.091	97.701	0.675
uvrA	Streptococcus pneumoniae TIGR4	69.091	97.701	0.675
uvrA	Streptococcus pneumoniae D39	69.091	97.701	0.675