Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | AAVD18_RS02855 | Genome accession | NZ_CP154893 |
| Coordinates | 507561..509657 (-) | Length | 698 a.a. |
| NCBI ID | WP_013352040.1 | Uniprot ID | A0A9P1JGN0 |
| Organism | Bacillus amyloliquefaciens strain Fad 11/2 | ||
| Function | repress competence development (at the early growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 502561..514657
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAVD18_RS02830 (AAVD18_02830) | - | 503130..503390 (+) | 261 | WP_013352035.1 | aspartyl-phosphate phosphatase Spo0E family protein | - |
| AAVD18_RS02835 (AAVD18_02835) | - | 503599..505098 (-) | 1500 | WP_013352036.1 | ATP-binding protein | - |
| AAVD18_RS02840 (AAVD18_02840) | - | 505316..505762 (+) | 447 | WP_013352037.1 | MarR family transcriptional regulator | - |
| AAVD18_RS02845 (AAVD18_02845) | motB | 505798..506607 (-) | 810 | WP_327861319.1 | flagellar motor protein MotB | - |
| AAVD18_RS02850 (AAVD18_02850) | motA | 506579..507394 (-) | 816 | WP_061573869.1 | flagellar motor stator protein MotA | - |
| AAVD18_RS02855 (AAVD18_02855) | clpE | 507561..509657 (-) | 2097 | WP_013352040.1 | ATP-dependent protease ATP-binding subunit ClpE | Regulator |
| AAVD18_RS02860 (AAVD18_02860) | - | 510055..511092 (+) | 1038 | WP_013352041.1 | membrane protein | - |
| AAVD18_RS02865 (AAVD18_02865) | - | 511191..512313 (+) | 1123 | Protein_551 | hypothetical protein | - |
| AAVD18_RS02870 (AAVD18_02870) | queC | 512565..513224 (+) | 660 | WP_003154679.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| AAVD18_RS02875 (AAVD18_02875) | queD | 513225..513665 (+) | 441 | WP_013352043.1 | 6-carboxytetrahydropterin synthase QueD | - |
| AAVD18_RS02880 (AAVD18_02880) | queE | 513658..514389 (+) | 732 | WP_013352044.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
Sequence
Protein
Download Length: 698 a.a. Molecular weight: 78004.15 Da Isoelectric Point: 5.2483
>NTDB_id=894352 AAVD18_RS02855 WP_013352040.1 507561..509657(-) (clpE) [Bacillus amyloliquefaciens strain Fad 11/2]
MRCQHCQKNEATIRLNMQVNSIQKQFVLCETCYTELTRKPSMSMGPQSFGFPFEQGFAPDQHKQQAGRKKGLLDELAQNV
TNGAKAGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIAEGDVPNKLKNKELYLLDVASLVAN
TGIRGQFEERMKQLMNELKERKNVILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVIGATTLKEYRQIEKDAALE
RRFQPVMVHEPSIEQAISILEGIKDKYEKYHSVTFSDEAIKACVTLSSRYIQDRHLPDKAIDLLDEAGSKANLELDTVNE
EEAAERLKAIDAEKTKALQEENYELAAKLRDEEVALEKQLAQESPVSSSEIGAEHIQAIIEQKTGIPVGKLQADEQVKMK
ELEERLHQRVIGQEKAVKKVAKAVRRSRAGLKSKNRPVGSFLFVGPTGVGKTELSKTLADELFGTKDSIIRLDMSEYMEK
HAVSKIIGSPPGYVGHDEAGQLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVLIMTSNA
GTGEKQTKVGFQSEESVMEEQTLIDSLSSFFKPEFLNRFDSIIEFQSLKKEHLVKIVSLLLAELEDTLKERGISLCVTDD
AKEKIAEIGYHPAFGARPLRRTIQELIEDEMTDLLLDDNEIKAFHVVMEEDDIKVRAQ
MRCQHCQKNEATIRLNMQVNSIQKQFVLCETCYTELTRKPSMSMGPQSFGFPFEQGFAPDQHKQQAGRKKGLLDELAQNV
TNGAKAGLIDPVIGRDEEVARVIEILNRRNKNNPVLIGEPGVGKTAIAEGLALKIAEGDVPNKLKNKELYLLDVASLVAN
TGIRGQFEERMKQLMNELKERKNVILFIDEIHLLVGAGSAEGSMDAGNILKPALARGELQVIGATTLKEYRQIEKDAALE
RRFQPVMVHEPSIEQAISILEGIKDKYEKYHSVTFSDEAIKACVTLSSRYIQDRHLPDKAIDLLDEAGSKANLELDTVNE
EEAAERLKAIDAEKTKALQEENYELAAKLRDEEVALEKQLAQESPVSSSEIGAEHIQAIIEQKTGIPVGKLQADEQVKMK
ELEERLHQRVIGQEKAVKKVAKAVRRSRAGLKSKNRPVGSFLFVGPTGVGKTELSKTLADELFGTKDSIIRLDMSEYMEK
HAVSKIIGSPPGYVGHDEAGQLTEKVRRNPYSIVLLDEIEKAHPDVQHMFLQIMEDGRLTDSQGRTVSFKDTVLIMTSNA
GTGEKQTKVGFQSEESVMEEQTLIDSLSSFFKPEFLNRFDSIIEFQSLKKEHLVKIVSLLLAELEDTLKERGISLCVTDD
AKEKIAEIGYHPAFGARPLRRTIQELIEDEMTDLLLDDNEIKAFHVVMEEDDIKVRAQ
Nucleotide
Download Length: 2097 bp
>NTDB_id=894352 AAVD18_RS02855 WP_013352040.1 507561..509657(-) (clpE) [Bacillus amyloliquefaciens strain Fad 11/2]
ATGCGTTGTCAACATTGTCAGAAAAACGAGGCGACGATTCGCCTGAACATGCAAGTCAATTCCATTCAAAAACAATTCGT
TTTATGTGAAACATGTTATACAGAATTAACCCGAAAACCGTCTATGAGCATGGGACCGCAATCTTTCGGATTCCCGTTTG
AGCAAGGTTTCGCTCCGGATCAACATAAACAGCAGGCCGGCCGTAAAAAAGGCCTGCTCGACGAGCTCGCCCAAAACGTC
ACAAACGGCGCAAAAGCAGGTCTGATTGATCCTGTGATCGGCCGCGATGAAGAAGTGGCGCGCGTCATTGAAATTTTGAA
CCGCCGGAATAAAAACAATCCGGTGCTTATCGGTGAACCGGGTGTCGGTAAAACGGCTATTGCAGAAGGCTTAGCGCTTA
AAATCGCTGAAGGCGATGTGCCGAATAAATTGAAAAACAAAGAGCTTTATCTGCTTGATGTCGCTTCCCTCGTCGCCAAT
ACAGGAATCAGAGGCCAGTTTGAAGAAAGAATGAAACAATTAATGAACGAATTAAAAGAGCGGAAAAACGTCATTTTGTT
CATTGATGAGATTCACCTTCTTGTAGGCGCCGGCTCTGCCGAGGGATCAATGGATGCCGGGAACATCCTGAAACCTGCGC
TTGCCAGAGGCGAACTGCAGGTCATCGGGGCGACGACATTGAAAGAGTACCGCCAGATTGAAAAAGATGCGGCGCTTGAA
AGACGCTTCCAGCCTGTCATGGTTCACGAGCCTTCTATAGAACAAGCCATCAGCATTCTTGAAGGCATTAAAGATAAATA
TGAGAAATACCACAGCGTCACATTCAGCGATGAAGCGATCAAGGCGTGTGTTACGCTTTCTTCCCGCTACATTCAGGACC
GCCACCTGCCGGATAAAGCGATCGACTTGTTAGATGAAGCCGGCTCCAAAGCAAATCTGGAGCTTGATACCGTAAATGAA
GAAGAAGCGGCTGAGCGACTCAAAGCAATTGACGCGGAGAAAACAAAAGCGCTTCAGGAAGAAAATTATGAGCTTGCCGC
GAAACTGCGTGATGAAGAAGTGGCATTGGAAAAGCAGCTGGCACAAGAATCACCGGTCTCTTCTTCAGAAATCGGGGCGG
AGCATATTCAAGCCATCATTGAACAGAAAACAGGCATTCCGGTCGGAAAACTGCAGGCTGATGAACAAGTCAAAATGAAA
GAACTTGAAGAACGCCTTCATCAGCGCGTCATCGGTCAGGAAAAAGCCGTGAAAAAAGTGGCGAAAGCGGTAAGACGAAG
CCGCGCCGGCTTAAAATCCAAAAACAGACCTGTCGGCTCCTTCCTCTTTGTCGGACCGACCGGGGTCGGAAAAACCGAGT
TATCAAAAACACTCGCGGATGAACTTTTCGGCACAAAAGATTCCATCATTCGGCTCGATATGAGTGAATACATGGAAAAA
CACGCCGTTTCAAAAATTATCGGTTCACCGCCGGGATATGTCGGACACGATGAAGCCGGTCAATTAACGGAAAAAGTACG
GCGCAATCCGTACAGCATCGTGCTCCTTGATGAGATTGAAAAAGCGCACCCTGACGTCCAGCATATGTTCCTGCAGATTA
TGGAGGACGGACGTCTGACAGACAGCCAGGGCAGAACGGTCAGCTTTAAAGATACCGTTTTGATCATGACAAGCAATGCG
GGAACCGGCGAAAAACAGACGAAAGTCGGGTTCCAATCTGAAGAAAGCGTTATGGAAGAACAAACGCTGATTGATTCACT
GAGCTCGTTCTTTAAACCTGAATTTTTAAACCGGTTTGACAGCATCATTGAATTCCAATCTCTGAAAAAAGAACATCTCG
TAAAAATCGTCAGTCTGCTTCTCGCAGAACTTGAAGACACATTAAAAGAGCGCGGCATCAGTCTCTGCGTCACAGACGAT
GCGAAAGAAAAAATCGCTGAAATCGGCTACCACCCTGCTTTCGGTGCACGCCCGCTCAGAAGAACGATCCAAGAATTGAT
CGAGGACGAAATGACAGACCTCTTATTGGATGACAATGAAATAAAAGCCTTCCATGTTGTAATGGAAGAGGATGACATCA
AAGTCCGTGCACAATAA
ATGCGTTGTCAACATTGTCAGAAAAACGAGGCGACGATTCGCCTGAACATGCAAGTCAATTCCATTCAAAAACAATTCGT
TTTATGTGAAACATGTTATACAGAATTAACCCGAAAACCGTCTATGAGCATGGGACCGCAATCTTTCGGATTCCCGTTTG
AGCAAGGTTTCGCTCCGGATCAACATAAACAGCAGGCCGGCCGTAAAAAAGGCCTGCTCGACGAGCTCGCCCAAAACGTC
ACAAACGGCGCAAAAGCAGGTCTGATTGATCCTGTGATCGGCCGCGATGAAGAAGTGGCGCGCGTCATTGAAATTTTGAA
CCGCCGGAATAAAAACAATCCGGTGCTTATCGGTGAACCGGGTGTCGGTAAAACGGCTATTGCAGAAGGCTTAGCGCTTA
AAATCGCTGAAGGCGATGTGCCGAATAAATTGAAAAACAAAGAGCTTTATCTGCTTGATGTCGCTTCCCTCGTCGCCAAT
ACAGGAATCAGAGGCCAGTTTGAAGAAAGAATGAAACAATTAATGAACGAATTAAAAGAGCGGAAAAACGTCATTTTGTT
CATTGATGAGATTCACCTTCTTGTAGGCGCCGGCTCTGCCGAGGGATCAATGGATGCCGGGAACATCCTGAAACCTGCGC
TTGCCAGAGGCGAACTGCAGGTCATCGGGGCGACGACATTGAAAGAGTACCGCCAGATTGAAAAAGATGCGGCGCTTGAA
AGACGCTTCCAGCCTGTCATGGTTCACGAGCCTTCTATAGAACAAGCCATCAGCATTCTTGAAGGCATTAAAGATAAATA
TGAGAAATACCACAGCGTCACATTCAGCGATGAAGCGATCAAGGCGTGTGTTACGCTTTCTTCCCGCTACATTCAGGACC
GCCACCTGCCGGATAAAGCGATCGACTTGTTAGATGAAGCCGGCTCCAAAGCAAATCTGGAGCTTGATACCGTAAATGAA
GAAGAAGCGGCTGAGCGACTCAAAGCAATTGACGCGGAGAAAACAAAAGCGCTTCAGGAAGAAAATTATGAGCTTGCCGC
GAAACTGCGTGATGAAGAAGTGGCATTGGAAAAGCAGCTGGCACAAGAATCACCGGTCTCTTCTTCAGAAATCGGGGCGG
AGCATATTCAAGCCATCATTGAACAGAAAACAGGCATTCCGGTCGGAAAACTGCAGGCTGATGAACAAGTCAAAATGAAA
GAACTTGAAGAACGCCTTCATCAGCGCGTCATCGGTCAGGAAAAAGCCGTGAAAAAAGTGGCGAAAGCGGTAAGACGAAG
CCGCGCCGGCTTAAAATCCAAAAACAGACCTGTCGGCTCCTTCCTCTTTGTCGGACCGACCGGGGTCGGAAAAACCGAGT
TATCAAAAACACTCGCGGATGAACTTTTCGGCACAAAAGATTCCATCATTCGGCTCGATATGAGTGAATACATGGAAAAA
CACGCCGTTTCAAAAATTATCGGTTCACCGCCGGGATATGTCGGACACGATGAAGCCGGTCAATTAACGGAAAAAGTACG
GCGCAATCCGTACAGCATCGTGCTCCTTGATGAGATTGAAAAAGCGCACCCTGACGTCCAGCATATGTTCCTGCAGATTA
TGGAGGACGGACGTCTGACAGACAGCCAGGGCAGAACGGTCAGCTTTAAAGATACCGTTTTGATCATGACAAGCAATGCG
GGAACCGGCGAAAAACAGACGAAAGTCGGGTTCCAATCTGAAGAAAGCGTTATGGAAGAACAAACGCTGATTGATTCACT
GAGCTCGTTCTTTAAACCTGAATTTTTAAACCGGTTTGACAGCATCATTGAATTCCAATCTCTGAAAAAAGAACATCTCG
TAAAAATCGTCAGTCTGCTTCTCGCAGAACTTGAAGACACATTAAAAGAGCGCGGCATCAGTCTCTGCGTCACAGACGAT
GCGAAAGAAAAAATCGCTGAAATCGGCTACCACCCTGCTTTCGGTGCACGCCCGCTCAGAAGAACGATCCAAGAATTGAT
CGAGGACGAAATGACAGACCTCTTATTGGATGACAATGAAATAAAAGCCTTCCATGTTGTAATGGAAGAGGATGACATCA
AAGTCCGTGCACAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus mutans UA159 |
57.319 |
100 |
0.6 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
56.369 |
100 |
0.596 |
| clpE | Streptococcus pneumoniae TIGR4 |
55.995 |
100 |
0.589 |
| clpE | Streptococcus pneumoniae D39 |
55.586 |
100 |
0.585 |
| clpE | Streptococcus pneumoniae Rx1 |
55.586 |
100 |
0.585 |
| clpE | Streptococcus pneumoniae R6 |
55.586 |
100 |
0.585 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
54.56 |
91.117 |
0.497 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
47.544 |
90.401 |
0.43 |
| clpC | Streptococcus pneumoniae TIGR4 |
46.365 |
88.682 |
0.411 |
| clpC | Streptococcus pneumoniae Rx1 |
46.365 |
88.682 |
0.411 |
| clpC | Streptococcus pneumoniae D39 |
46.365 |
88.682 |
0.411 |
| clpC | Streptococcus thermophilus LMD-9 |
45.455 |
88.252 |
0.401 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.114 |
87.966 |
0.397 |
| clpC | Streptococcus mutans UA159 |
45.114 |
87.966 |
0.397 |
| clpA | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
41.749 |
86.819 |
0.362 |