Detailed information NTG0894340

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: R3Y73_RS07575
• Genome accession: NZ_CP137015
• Coordinates: 1525101..1526264 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain CYS06
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1520101..1531264

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R3Y73_RS07545 (R3Y73_07545)	-	1520366..1520785 (-)	420	WP_043867469.1	TIGR03826 family flagellar region protein	-
R3Y73_RS07550 (R3Y73_07550)	comFC	1520859..1521548 (-)	690	WP_202980098.1	phosphoribosyltransferase family protein	Machinery gene
R3Y73_RS07555 (R3Y73_07555)	-	1521554..1521838 (-)	285	WP_017418816.1	late competence development ComFB family protein	-
R3Y73_RS07560 (R3Y73_07560)	comFA	1521896..1523281 (-)	1386	WP_176283561.1	DEAD/DEAH box helicase	Machinery gene
R3Y73_RS07565 (R3Y73_07565)	-	1523389..1524237 (-)	849	WP_003151387.1	DegV family protein	-
R3Y73_RS07570 (R3Y73_07570)	degU	1524335..1525024 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
R3Y73_RS07575 (R3Y73_07575)	degS	1525101..1526264 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
R3Y73_RS07580 (R3Y73_07580)	-	1526487..1527134 (+)	648	WP_060657503.1	YigZ family protein	-
R3Y73_RS07585 (R3Y73_07585)	-	1527139..1528314 (+)	1176	WP_176283562.1	LCP family protein	-
R3Y73_RS07590 (R3Y73_07590)	-	1528404..1529480 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
R3Y73_RS07595 (R3Y73_07595)	tuaH	1529613..1530809 (-)	1197	WP_070082461.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=894340 R3Y73_RS07575 WP_003151385.1 1525101..1526264(-) (degS) [Bacillus velezensis strain CYS06]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=894340 R3Y73_RS07575 WP_003151385.1 1525101..1526264(-) (degS) [Bacillus velezensis strain CYS06]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTGAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATCGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948