Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   R3Y73_RS05565 Genome accession   NZ_CP137015
Coordinates   1131098..1133404 (-) Length   768 a.a.
NCBI ID   WP_165409405.1    Uniprot ID   -
Organism   Bacillus velezensis strain CYS06     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1126098..1138404
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R3Y73_RS05525 (R3Y73_05525) - 1126558..1126989 (+) 432 WP_077722765.1 Na(+)/H(+) antiporter subunit B -
  R3Y73_RS05530 (R3Y73_05530) - 1126989..1127330 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  R3Y73_RS05535 (R3Y73_05535) - 1127323..1128804 (+) 1482 WP_077722766.1 Na+/H+ antiporter subunit D -
  R3Y73_RS05540 (R3Y73_05540) - 1128810..1129286 (+) 477 WP_077722767.1 Na+/H+ antiporter subunit E -
  R3Y73_RS05545 (R3Y73_05545) - 1129286..1129570 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  R3Y73_RS05550 (R3Y73_05550) mnhG 1129554..1129928 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  R3Y73_RS05555 (R3Y73_05555) - 1129968..1130351 (-) 384 WP_007613430.1 hotdog fold thioesterase -
  R3Y73_RS05560 (R3Y73_05560) comA 1130373..1131017 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  R3Y73_RS05565 (R3Y73_05565) comP 1131098..1133404 (-) 2307 WP_165409405.1 sensor histidine kinase Regulator
  R3Y73_RS05570 (R3Y73_05570) comX 1133423..1133599 (-) 177 WP_044052947.1 competence pheromone ComX -
  R3Y73_RS05575 (R3Y73_05575) - 1133614..1134489 (-) 876 WP_146277410.1 polyprenyl synthetase family protein -
  R3Y73_RS05580 (R3Y73_05580) degQ 1134641..1134781 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  R3Y73_RS05585 (R3Y73_05585) - 1135246..1135587 (+) 342 WP_014305721.1 hypothetical protein -
  R3Y73_RS05590 (R3Y73_05590) - 1135594..1136814 (-) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 768 a.a.        Molecular weight: 89377.56 Da        Isoelectric Point: 8.2109

>NTDB_id=894333 R3Y73_RS05565 WP_165409405.1 1131098..1133404(-) (comP) [Bacillus velezensis strain CYS06]
MKKFIRNFSIVLLFVSLFYVAHIIYFTQNGILVGTYVVENNNHELQVVKLSKSTYGKYMGLKEGDRIIEISGKTPTEENI
RGQYLAKAEHMKIIRGNSKIDLHNTEFISLNSSYSFFIYIIPCILFALSMLCIFYIYKVNRVKDTYSAYILIIFLLCTSI
AYLSAGGVTRGYEINRYINLFTFLNVPVLYFHFLYQYFKELKLKFSAGYVVSTLYILPVINIIIEIFQKHFAFQLVTNIN
LVTFFLEMMVVYTSIIFYGLVYRKKDHFYLLKVLLISNTIAFFPFTVFYIIPEVLFGQYIYSAIVTAPFLIIIPLALVYQ
FVVNKIYDIDFLLGRIRYYGFLSIIPTIGVVWLNILFDSKGNNFNIIQITVYVFLIFLAVFYIKELLDYKFRLKRFSEKY
NYQDSIYKYTQLLKSVSALNQVFMNLKKTILDVLPVSKAYIFEINSDGDILYFDKQNSEPNWQPYKKEFDKVTSEIGKIF
EVNQGFLMKIGERGANSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENILQIEELMNHLQDLKQQGSNPVWLKKLM
FTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKREEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDL
GLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGV
GCNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=894333 R3Y73_RS05565 WP_165409405.1 1131098..1133404(-) (comP) [Bacillus velezensis strain CYS06]
TTGAAAAAATTCATTAGAAATTTTTCGATTGTATTGTTATTCGTCAGTCTCTTTTACGTCGCTCATATTATATATTTTAC
TCAAAACGGAATTTTGGTAGGAACCTATGTGGTTGAAAACAATAACCATGAATTGCAGGTTGTAAAACTCTCCAAGTCTA
CGTATGGTAAATATATGGGCTTAAAAGAGGGAGACAGGATAATTGAAATAAGCGGAAAAACACCGACAGAAGAGAATATA
AGAGGTCAATATCTAGCGAAAGCTGAACATATGAAAATAATAAGGGGTAATAGTAAAATAGACTTACATAATACTGAGTT
TATTTCCTTAAATAGCTCTTATAGTTTTTTTATCTATATTATCCCATGCATATTATTTGCTTTAAGCATGTTATGCATTT
TTTATATTTATAAAGTTAACAGAGTAAAAGATACTTATTCAGCCTATATTTTGATTATTTTTTTATTGTGTACATCCATT
GCATATTTAAGCGCAGGTGGAGTAACTAGAGGATATGAAATAAACAGATATATTAACCTTTTTACATTTTTGAACGTACC
TGTATTATACTTTCACTTTTTGTATCAATACTTTAAAGAATTAAAATTGAAATTTTCAGCTGGTTATGTTGTGTCTACTC
TCTATATATTGCCGGTTATTAATATAATAATCGAGATATTCCAGAAGCATTTTGCCTTCCAACTTGTTACGAATATTAAT
TTAGTAACATTTTTTTTGGAAATGATGGTCGTCTATACATCCATTATTTTTTATGGACTAGTCTACCGAAAAAAGGATCA
CTTTTATTTGCTGAAAGTGTTACTTATATCTAATACCATAGCCTTTTTTCCGTTTACAGTATTTTATATTATACCTGAGG
TGTTGTTCGGACAGTATATTTATTCTGCTATAGTTACGGCACCATTTTTAATAATTATTCCATTAGCTTTAGTCTATCAA
TTCGTGGTCAATAAAATCTACGATATAGACTTCTTGTTGGGCAGAATCAGGTACTATGGTTTCCTTTCCATTATTCCGAC
TATTGGAGTTGTATGGCTGAATATATTATTCGACAGCAAGGGGAATAACTTTAACATTATTCAAATCACTGTATATGTAT
TTTTGATTTTTTTAGCGGTATTTTATATTAAGGAGTTATTAGACTACAAATTTCGCCTGAAACGTTTTTCAGAAAAATAT
AATTATCAAGACAGCATTTATAAATATACACAGCTTCTTAAAAGCGTATCAGCTTTAAATCAAGTGTTTATGAATTTGAA
AAAGACTATTTTGGACGTCTTGCCTGTTAGTAAAGCTTATATATTTGAAATCAATTCTGACGGAGACATTCTGTATTTTG
ATAAACAGAACAGTGAACCGAACTGGCAGCCGTATAAAAAAGAATTTGATAAAGTCACATCAGAGATTGGCAAGATTTTT
GAAGTAAATCAAGGTTTTCTGATGAAGATTGGAGAAAGAGGGGCAAACTCATACGTTCTGCTTTGTTTGTCGAGCATTAA
TACTCCGAGACTGACAAGAGATGAGATATCTTGGTTAAAGACATTGTCTTTTTATACAAGTGTTTCGATGGAAAACATAT
TGCAGATCGAAGAACTCATGAACCATTTACAAGACCTGAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATG
TTTACGATCGAGGAAAAGCAGCGTTCGGATTTAGCCCGTGATCTGCATGATTCGGTGCTGCAGGACTTGATTTCTTTGAA
GCGTCAGTGTGAGCTGTTTCTGGCTGATTTTAAAAGAGAAGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGA
TGAATGAGCAGATGTCGGATGTTATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGTCCTCAGCTGCTGTATGATTTG
GGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCG
GTTTACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGC
ATTCACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTC
GGCTGCAATCAGGAAGAAGGCGGCGGACAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAACGCGTCCGTGCGCTTGA
CGGACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(568-637)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

59.144

100

0.594