Detailed information NTG0894321

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: R3Y73_RS03005
• Genome accession: NZ_CP137015
• Coordinates: 653180..655531 (-)
• Length: 783 a.a.
• NCBI ID: WP_077722611.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain CYS06
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 648180..660531

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R3Y73_RS02970 (R3Y73_02970)	-	648543..648881 (-)	339	WP_007408270.1	YqxA family protein	-
R3Y73_RS02975 (R3Y73_02975)	spoIIP	648898..650091 (-)	1194	WP_013352939.1	stage II sporulation protein P	-
R3Y73_RS02980 (R3Y73_02980)	gpr	650159..651265 (-)	1107	WP_172614837.1	GPR endopeptidase	-
R3Y73_RS02985 (R3Y73_02985)	rpsT	651468..651734 (+)	267	WP_003152876.1	30S ribosomal protein S20	-
R3Y73_RS02990 (R3Y73_02990)	holA	651751..652792 (-)	1042	Protein_593	DNA polymerase III subunit delta	-
R3Y73_RS02995 (R3Y73_02995)	-	652832..652986 (-)	155	Protein_594	hypothetical protein	-
R3Y73_RS03000 (R3Y73_03000)	-	653027..653161 (+)	135	WP_003152870.1	YqzM family protein	-
R3Y73_RS03005 (R3Y73_03005)	comEC	653180..655531 (-)	2352	WP_077722611.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
R3Y73_RS03010 (R3Y73_03010)	-	655532..656101 (-)	570	WP_003152868.1	ComE operon protein 2	-
R3Y73_RS03015 (R3Y73_03015)	comEA	656168..656782 (-)	615	WP_013352942.1	helix-hairpin-helix domain-containing protein	Machinery gene
R3Y73_RS03020 (R3Y73_03020)	comER	656841..657662 (+)	822	WP_014305449.1	late competence protein ComER	-
R3Y73_RS03025 (R3Y73_03025)	-	657731..658468 (-)	738	WP_031378935.1	class I SAM-dependent methyltransferase	-
R3Y73_RS03030 (R3Y73_03030)	rsfS	658465..658821 (-)	357	WP_003152864.1	ribosome silencing factor	-
R3Y73_RS03035 (R3Y73_03035)	yqeK	658839..659399 (-)	561	WP_077722612.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
R3Y73_RS03040 (R3Y73_03040)	-	659389..659958 (-)	570	WP_003152860.1	nicotinate-nucleotide adenylyltransferase	-
R3Y73_RS03045 (R3Y73_03045)	yhbY	659969..660259 (-)	291	WP_003152858.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 783 a.a.
• Molecular weight: 86807.83 Da
• Isoelectric Point: 9.0931

>NTDB_id=894321 R3Y73_RS03005 WP_077722611.1 653180..655531(-) (comEC) [Bacillus velezensis strain CYS06]
MKYKYLLLPLAAVSATAGIAAAHVFWVLLLFLLYLLFIMIKTKQPAPVIICLVSFCVYFFLYTVCDAANVTRYQAGSYTE
QAVITNIPKVDGAKMSAVIRTHDKEKWAASYKIRSLEEKRLIEQLEPGMRCTFTGSLEQPAHATIPGGFDYKEYLYSQQI
HWLFSVTSIQRCEKSKQPLFKLLNIRKNLISIIRNHVPESSAGIVEALTLGERFSIEDDILSAYQNLGVVHLMAISGMHV
GLITAGLFYALIRIGLTREKAGMLLLLFLPVYTLLSGAAPSVLRASLMLGFYIAGTLVKRGIHSSAALSLSYLLLLLFNP
YFLWQAGFQLSFAVSASLILSSSILKKAGKSRLAGLAMASFIAELSSLPFLLYHFQQISLVSFPMNMVMVPFYTLFVIPV
SVIGFLLLLLSRQMGECLFDMFDLVMKPVHDFITYAASVDLFTMIVSKPDFLSLLLLAVSVFTLFAALEKGGFLKLRKSA
LFFCAVLAYLICRPYFSPWGEADMLDIGQGDSLFISAPYRKGTVMVDTGGVIAYPGESWKEKRHPYSIGEKVLIPFLNGK
GVKKLDALFLTHADQDHIGEAGVLIKNHRVKRLIVPVGFVKEPKDQNILKMAKENNIPVAEAKRGDTITAGDLQFQVLSP
ESSDGKSKNDSSLVLWTVLGGVSWLLTGDLESDGETEVLKTYPKLKADILKAGHHGSKSSTSEAFLKQLQPEAALISAGK
ENRYHHPHEEVLDRLKAYSVNVLRTDISGTIQYRFEKGAGTFSVFPPYDIEETRAQEVKKTAD

Nucleotide

• Length: 2352 bp

>NTDB_id=894321 R3Y73_RS03005 WP_077722611.1 653180..655531(-) (comEC) [Bacillus velezensis strain CYS06]
ATGAAATATAAATACCTTCTTCTGCCTCTGGCGGCGGTTTCTGCAACTGCGGGAATTGCCGCCGCTCATGTCTTCTGGGT
TCTGCTCCTTTTTCTTCTGTATCTTCTCTTTATTATGATAAAAACAAAGCAGCCTGCTCCGGTTATCATCTGCCTCGTTT
CTTTTTGTGTTTATTTCTTTCTTTATACGGTTTGTGACGCTGCGAATGTAACGCGATATCAGGCCGGCAGTTATACTGAA
CAGGCCGTCATCACTAATATTCCGAAGGTTGACGGAGCGAAAATGTCAGCCGTTATCCGTACACATGACAAGGAAAAATG
GGCGGCTTCGTATAAAATCCGGTCTCTTGAGGAAAAGAGACTCATTGAACAGCTTGAACCGGGGATGCGCTGCACGTTTA
CAGGCTCTCTGGAACAGCCTGCACATGCGACGATTCCCGGAGGTTTTGATTATAAGGAATATCTTTACTCTCAGCAGATT
CACTGGTTATTTTCCGTGACTTCCATTCAGCGGTGTGAAAAATCCAAACAGCCGCTGTTTAAACTGCTGAACATCAGAAA
AAATTTGATTTCAATCATTCGGAATCACGTGCCTGAATCTTCCGCCGGAATTGTTGAAGCGCTGACCTTAGGTGAAAGAT
TTTCTATAGAGGACGATATACTGAGTGCATATCAAAATCTGGGAGTCGTTCATTTAATGGCGATTTCAGGAATGCATGTC
GGTCTTATTACGGCGGGACTATTTTATGCTCTGATCAGAATCGGGCTGACAAGAGAAAAGGCGGGGATGTTGCTGCTGCT
GTTTTTGCCGGTATATACGCTGCTGAGCGGTGCCGCCCCATCCGTATTGCGCGCATCCCTCATGCTGGGATTTTATATCG
CCGGAACTCTTGTTAAACGCGGCATTCATTCCTCTGCTGCATTGTCTCTGTCTTATCTGCTGCTCCTGCTGTTTAATCCT
TACTTCCTTTGGCAGGCGGGCTTCCAGCTTTCCTTTGCGGTAAGCGCCTCTTTAATTCTGTCATCCTCCATTTTAAAGAA
AGCGGGGAAAAGCAGACTTGCCGGGCTTGCGATGGCCTCATTCATTGCAGAGCTCAGCTCACTTCCGTTTCTTCTCTATC
ATTTTCAACAAATTTCACTTGTCAGTTTTCCGATGAACATGGTGATGGTGCCATTTTATACGTTATTTGTCATTCCGGTT
TCTGTCATCGGCTTCCTTCTTCTTTTGCTTTCAAGGCAGATGGGAGAATGTTTGTTTGATATGTTTGACCTTGTGATGAA
GCCTGTGCATGATTTCATTACATATGCGGCATCCGTTGATTTATTTACTATGATTGTGTCAAAGCCTGACTTTCTTTCCC
TTCTTCTGCTTGCGGTTTCCGTTTTTACGCTTTTTGCGGCTTTGGAAAAGGGAGGTTTTTTAAAACTCAGGAAATCGGCT
CTTTTTTTCTGCGCGGTTTTGGCTTATTTAATATGCCGTCCGTATTTCAGTCCATGGGGAGAAGCGGATATGCTTGATAT
CGGGCAGGGAGACTCGCTGTTTATAAGCGCGCCATACCGCAAAGGGACCGTAATGGTTGATACAGGGGGAGTGATTGCTT
ATCCCGGAGAATCATGGAAAGAAAAACGCCACCCGTATTCTATCGGCGAGAAGGTTTTGATTCCGTTTTTAAACGGAAAA
GGGGTGAAAAAGCTGGATGCGCTGTTTTTAACCCATGCGGATCAGGATCACATCGGAGAAGCCGGAGTGTTAATCAAAAA
TCATAGAGTCAAACGGTTAATTGTCCCCGTGGGATTCGTAAAAGAACCGAAGGATCAGAACATATTAAAAATGGCGAAAG
AAAACAACATTCCCGTTGCCGAAGCAAAGCGGGGCGACACCATTACAGCGGGTGATCTTCAGTTTCAGGTGCTGTCTCCG
GAGTCATCTGACGGAAAGAGTAAAAATGATTCATCACTGGTGCTTTGGACGGTTTTAGGCGGAGTGAGCTGGCTTTTGAC
GGGAGATTTAGAATCGGACGGCGAAACAGAAGTGCTGAAAACGTATCCGAAACTGAAGGCTGATATATTGAAGGCGGGTC
ATCACGGCAGCAAAAGCTCAACGAGTGAAGCCTTTTTGAAACAGCTTCAGCCGGAAGCAGCGCTGATTTCAGCAGGAAAA
GAGAATCGATACCATCATCCGCATGAAGAAGTGCTGGATCGTTTGAAGGCGTACTCTGTCAATGTGCTTCGCACCGATAT
CAGCGGAACGATTCAATACAGATTTGAAAAAGGCGCCGGAACGTTTTCCGTCTTCCCTCCATATGATATAGAAGAAACCA
GGGCGCAAGAAGTAAAAAAGACTGCCGATTGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (208-469)

• Metallo-beta-lactamase superfamily (Lactamase_B) (508-719)

• Domain of unknown function (DUF4131) (DUF4131) (25-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	56.218	98.595	0.554