Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   AAFU62_RS02595 Genome accession   NZ_CP154891
Coordinates   510608..511249 (+) Length   213 a.a.
NCBI ID   WP_002983671.1    Uniprot ID   A0A0H2UW05
Organism   Streptococcus pyogenes strain 318231     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 505608..516249
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAFU62_RS02575 (AAFU62_02575) - 506164..506904 (+) 741 WP_002983660.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  AAFU62_RS02580 (AAFU62_02580) pknB 506901..508799 (+) 1899 WP_012560855.1 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  AAFU62_RS02585 (AAFU62_02585) liaF 508922..509614 (+) 693 WP_011054833.1 cell wall-active antibiotics response protein LiaF -
  AAFU62_RS02590 (AAFU62_02590) - 509611..510615 (+) 1005 WP_002991890.1 sensor histidine kinase -
  AAFU62_RS02595 (AAFU62_02595) vraR 510608..511249 (+) 642 WP_002983671.1 response regulator transcription factor Regulator
  AAFU62_RS02600 (AAFU62_02600) - 511286..512686 (+) 1401 WP_136268377.1 bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase -
  AAFU62_RS02605 (AAFU62_02605) - 512686..513063 (+) 378 WP_002983674.1 S1 RNA-binding domain-containing protein -
  AAFU62_RS02610 (AAFU62_02610) cysK 513081..514022 (-) 942 WP_009880467.1 cysteine synthase A -
  AAFU62_RS02615 (AAFU62_02615) - 514150..514782 (-) 633 WP_032465870.1 YigZ family protein -
  AAFU62_RS02620 (AAFU62_02620) - 514838..516162 (+) 1325 Protein_463 DEAD/DEAH box helicase -

Sequence

Protein


Download         Length: 213 a.a.        Molecular weight: 23751.43 Da        Isoelectric Point: 5.1641

>NTDB_id=894278 AAFU62_RS02595 WP_002983671.1 510608..511249(+) (vraR) [Streptococcus pyogenes strain 318231]
MSKIKVILVDDHEMVRMGLKSFLNLQADIDVVGEASNGREGVDLALALKPDVLVMDLVMPELGGVEATLEVLKKWKEAKV
LVLTSYLDNEKIYPVIDAGAKGYMLKTSSAAEILNAIRKVSKGELAIETEVDKKIKAHDQHPDLHEELTAREYDILHLLA
KGYDNQTIADELFISLKTVKTHVSNILAKLEVDDRTQAVVYAFRHHLVPQDDN

Nucleotide


Download         Length: 642 bp        

>NTDB_id=894278 AAFU62_RS02595 WP_002983671.1 510608..511249(+) (vraR) [Streptococcus pyogenes strain 318231]
ATGAGTAAGATAAAAGTGATATTGGTCGATGATCATGAAATGGTCCGCATGGGACTCAAGAGTTTTTTGAATTTACAAGC
TGATATTGATGTCGTTGGTGAGGCCTCTAATGGACGTGAAGGGGTTGATTTGGCATTGGCTTTGAAGCCAGATGTTTTGG
TTATGGATCTAGTGATGCCAGAGTTAGGCGGTGTTGAGGCAACTTTAGAAGTCCTAAAAAAATGGAAAGAGGCTAAGGTA
CTTGTGTTAACTTCCTATCTAGATAATGAAAAGATATACCCTGTCATTGATGCAGGAGCGAAGGGTTATATGTTAAAAAC
ATCGAGTGCGGCTGAAATTTTAAATGCCATTCGCAAGGTTTCAAAGGGAGAGTTAGCCATTGAAACAGAAGTTGACAAAA
AAATTAAGGCGCATGATCAACACCCTGACTTGCATGAGGAACTAACAGCGCGTGAGTATGATATTTTACACCTTTTAGCT
AAAGGGTATGATAATCAGACCATCGCTGATGAACTCTTTATTTCCTTAAAAACCGTCAAAACACATGTGTCCAATATTCT
AGCCAAGTTAGAAGTTGATGACCGAACCCAAGCGGTTGTCTATGCTTTTCGACACCATTTAGTCCCCCAAGACGATAATT
AA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-118)

Bacterial regulatory proteins, luxR family (GerE)

(148-202)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UW05

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

52.913

96.714

0.512
  degU Bacillus subtilis subsp. subtilis str. 168

36.283

100

0.385