Detailed information NTG0089418

Bioinformatically predicted

Overview

• Name: luxQ
• Type: Regulator
• Locus tag: OCU34_RS15385
• Genome accession: NZ_AP024912
• Coordinates: 390681..393260 (+)
• Length: 859 a.a.
• NCBI ID: WP_123014170.1
• Uniprot ID: -
• Organism: Vibrio zhugei strain KCTC 62784
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 385681..398260

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCU34_RS15360	-	387950..388162 (-)	213	Protein_356	IS66 family transposase	-
OCU34_RS15365	tnpB	388222..388575 (-)	354	WP_164711753.1	IS66 family insertion sequence element accessory protein TnpB	-
OCU34_RS15370	tnpA	388572..388892 (-)	321	Protein_358	IS66 family insertion sequence element accessory protein TnpA	-
OCU34_RS15375	-	389206..389382 (+)	177	Protein_359	conjugal transfer protein TraF	-
OCU34_RS15380	luxP	389566..390669 (+)	1104	WP_123014169.1	substrate-binding domain-containing protein	Regulator
OCU34_RS15385	luxQ	390681..393260 (+)	2580	WP_123014170.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
OCU34_RS15390	-	393257..393781 (-)	525	WP_123014171.1	hypothetical protein	-
OCU34_RS15395	modA	394174..394956 (+)	783	WP_123014172.1	molybdate ABC transporter substrate-binding protein	-
OCU34_RS15400	modB	394959..395648 (+)	690	WP_123014173.1	molybdate ABC transporter permease subunit	-
OCU34_RS15405	modC	395648..396772 (+)	1125	WP_123014174.1	molybdenum ABC transporter ATP-binding protein ModC	-
OCU34_RS15410	-	396769..397989 (-)	1221	WP_123014175.1	hydroxymethylglutaryl-CoA reductase	-

Sequence

Protein

• Length: 859 a.a.
• Molecular weight: 97385.94 Da
• Isoelectric Point: 6.0346

>NTDB_id=89418 OCU34_RS15385 WP_123014170.1 390681..393260(+) (luxQ) [Vibrio zhugei strain KCTC 62784]
MMQQEKIIKPKKHIANFVSYAIIIVLGVLILSVLFQSYQISSRIMSQEVKRTSRQTSNLVQSLFDYRLSTLQIHQDSSAQ
SQSLVSLIENHQLRAIDQYFNRVDQLEITNTPDIRFITTTNGLVWDDGNAQFYGIVGKSLSKIINRVAFNSNWHLVASPS
QLKTMYLLMRRSPMVDQETGQVSGFLYAGIVLNNNYALLETMRDGSNSESLIMTAGKHVLASTLSGREAYQATDIIDSKQ
DQGIYNQYMVSSATLMVEGVSTYLKVYSVQNNHNALSLRNSYYFWMAFALVAMAIVAFVTRWWLQRRIECEISRLMSYTH
QVANQGDDKSFPGSVIYEFDHFGRTLEQTFSRLADQEKQFEDLFNYTTSPMLLWSADGSLIKMNPSARDECLNQYENGKT
LYTALAEQLQTMVRDTTQGLQTESVLTKLGDKMFRWNLSPITVNDEITSVIAQGHDITTILEAEKQSRLARKEAEESARL
RADFLAQMSHELRTPLNGIIGVSQLLQRTVKTKEQIEQVKVLCSSGEHLLAVLSDILDFSRIEQGKFTLKPTEFRLADLA
MTIEQIYQPLCREKHLSLNVTSNIPDTMYVRNDQVRINQILFNLLNNSTKFTHEGRIDVDMRVHESPESTYLSVDVRDTG
IGINEDDLNVVFEPFMQVGAPNTREYGGSGLGLSIVKNLLDMLDGEIKVTSAMNEGTQFSLFIPLTVISHAHSLPVVAPD
EIDFALFEHPIEVLLVEDNHTNAFIARTFCEKYNIHTDWVTNGIQAIEKLKNQHYDLVLMDNQLPHLGGVEATQRIKQEL
QLPVVVYACTADGMGDTRDAFIAAGAEYVLVKPIKELNLYRALRHFKTKYVQRTPSSTH

Nucleotide

• Length: 2580 bp

>NTDB_id=89418 OCU34_RS15385 WP_123014170.1 390681..393260(+) (luxQ) [Vibrio zhugei strain KCTC 62784]
ATGATGCAGCAAGAAAAGATAATTAAACCGAAAAAGCACATCGCGAACTTTGTCAGTTACGCGATTATCATTGTGCTTGG
CGTGTTAATTTTGAGTGTGTTGTTTCAAAGTTATCAAATCAGTAGTCGTATTATGTCTCAGGAAGTCAAACGAACGTCTC
GGCAAACGAGCAATTTAGTGCAGAGTTTGTTTGATTATCGCTTGTCTACCCTACAAATTCACCAAGATAGTAGCGCGCAA
AGTCAAAGCTTAGTGAGTTTGATCGAGAACCATCAATTAAGAGCCATTGATCAATATTTTAATCGTGTCGATCAACTTGA
GATTACCAATACCCCAGATATTCGTTTTATCACCACCACGAACGGCTTGGTGTGGGATGACGGCAACGCACAGTTTTATG
GCATTGTTGGCAAGAGTCTATCGAAAATCATCAACCGAGTGGCGTTTAACAGTAATTGGCACCTTGTTGCGTCTCCCTCA
CAGTTAAAAACCATGTATTTGTTGATGCGGCGCTCACCGATGGTGGATCAAGAAACAGGGCAGGTCAGTGGGTTTCTTTA
TGCCGGTATTGTATTAAATAACAACTATGCCTTGCTTGAAACCATGCGCGATGGCAGCAATTCTGAAAGCCTTATCATGA
CGGCCGGAAAGCATGTTTTGGCATCGACTTTGAGTGGACGCGAGGCGTATCAAGCGACGGACATTATTGATTCGAAACAA
GATCAAGGCATCTACAACCAGTATATGGTCAGTAGTGCGACATTAATGGTCGAAGGAGTCTCGACCTATTTGAAAGTCTA
CTCGGTACAAAATAACCACAACGCTTTATCATTAAGAAACAGTTATTACTTTTGGATGGCGTTCGCACTGGTTGCCATGG
CTATTGTTGCTTTTGTTACTCGTTGGTGGTTGCAACGGCGTATTGAATGTGAAATAAGCCGCTTAATGTCATACACCCAT
CAAGTCGCGAATCAAGGGGACGACAAATCCTTCCCTGGTTCCGTGATATATGAGTTTGATCATTTTGGCCGCACATTGGA
ACAAACCTTTTCTCGTTTAGCCGATCAAGAAAAACAATTCGAAGATTTGTTTAACTACACCACGTCTCCCATGTTGTTGT
GGTCGGCCGATGGTTCGTTAATCAAAATGAACCCTTCAGCGCGAGATGAGTGCTTAAACCAATACGAAAATGGTAAAACA
TTGTATACCGCGTTAGCTGAGCAGCTACAGACCATGGTTCGAGATACGACCCAAGGGTTACAAACGGAGTCTGTATTGAC
CAAGCTCGGAGATAAAATGTTTCGGTGGAACCTATCTCCGATCACCGTTAATGATGAAATTACTTCTGTAATCGCGCAGG
GGCATGACATCACAACGATTCTAGAAGCAGAAAAACAAAGTCGCCTAGCACGTAAAGAAGCGGAAGAGTCAGCGCGCTTA
CGTGCGGACTTTTTAGCACAAATGAGCCATGAATTACGCACGCCACTTAATGGGATTATCGGGGTTTCACAGTTATTGCA
GCGTACGGTGAAAACCAAAGAACAGATCGAACAAGTGAAGGTTTTGTGCAGTAGTGGTGAGCATTTACTGGCCGTATTAA
GCGATATTCTTGATTTTTCTCGTATTGAGCAAGGTAAGTTCACACTGAAACCGACGGAATTTCGTTTAGCGGATTTAGCG
ATGACCATCGAGCAAATCTATCAGCCGTTGTGTCGTGAAAAACACTTGAGCTTGAATGTGACGAGCAACATTCCTGACAC
GATGTACGTGCGCAATGACCAAGTTCGGATTAACCAAATTCTTTTTAACCTTCTTAATAATTCGACTAAGTTCACTCATG
AAGGCCGTATTGATGTCGATATGCGTGTGCATGAAAGTCCCGAATCTACCTACTTGAGTGTCGATGTGCGCGACACTGGG
ATTGGCATCAATGAAGACGATTTAAACGTGGTGTTTGAACCCTTTATGCAGGTCGGGGCGCCCAATACCCGTGAGTACGG
CGGCAGTGGTCTGGGATTGTCTATTGTGAAAAACTTACTAGACATGCTCGATGGAGAGATAAAGGTGACCTCTGCCATGA
ATGAAGGCACGCAATTTTCGTTATTCATTCCATTAACGGTGATTTCACATGCTCATTCTTTACCGGTGGTGGCGCCTGAT
GAGATCGACTTTGCCTTATTTGAGCATCCCATTGAGGTACTCCTAGTCGAAGATAATCATACCAATGCGTTTATTGCTCG
GACATTTTGTGAGAAATACAATATTCACACCGATTGGGTGACTAATGGCATTCAAGCGATTGAAAAGCTAAAAAACCAGC
ATTATGATTTAGTGTTGATGGATAACCAATTACCGCATTTAGGCGGGGTTGAAGCCACTCAGCGTATTAAGCAAGAATTA
CAATTACCCGTGGTAGTGTATGCCTGTACTGCCGATGGCATGGGGGATACCCGAGATGCTTTCATCGCGGCAGGGGCCGA
GTACGTGTTAGTCAAGCCCATTAAAGAACTCAATTTATATCGAGCGCTGCGTCACTTTAAAACAAAGTATGTACAGCGCA
CCCCATCATCGACACATTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (481-545)

• LuxQ, periplasmic (LuxQ-periplasm) (41-278)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (592-706)

• Response regulator receiver domain (Response_reg) (733-843)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxQ	Vibrio cholerae strain A1552	55.437	98.487	0.546