Detailed information NTG0894046

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: R0Q54_RS08535
• Genome accession: NZ_CP136992
• Coordinates: 1583549..1584694 (+)
• Length: 381 a.a.
• NCBI ID: WP_014481226.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain J46
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1578549..1589694

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R0Q54_RS08510 (R0Q54_08510)	albF	1578565..1579845 (+)	1281	WP_069964371.1	M16 family metallopeptidase	-
R0Q54_RS08515 (R0Q54_08515)	albG	1579842..1580543 (+)	702	WP_014481222.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
R0Q54_RS08520 (R0Q54_08520)	ywhL	1580549..1581925 (-)	1377	WP_014481223.1	YncE family protein	-
R0Q54_RS08525 (R0Q54_08525)	ywhK	1581964..1583319 (-)	1356	WP_014481224.1	YncE family protein	-
R0Q54_RS08530 (R0Q54_08530)	-	1583316..1583546 (-)	231	Protein_1675	hypothetical protein	-
R0Q54_RS08535 (R0Q54_08535)	rapF	1583549..1584694 (+)	1146	WP_014481226.1	response regulator aspartate phosphatase RapF	Regulator
R0Q54_RS08540 (R0Q54_08540)	phrF	1584678..1584797 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
R0Q54_RS08545 (R0Q54_08545)	-	1584895..1585322 (+)	428	Protein_1678	YbaK/EbsC family protein	-
R0Q54_RS08550 (R0Q54_08550)	speB	1585387..1586259 (-)	873	WP_003227545.1	agmatinase	-
R0Q54_RS08555 (R0Q54_08555)	speE	1586320..1587150 (-)	831	WP_003227543.1	spermidine synthase	-
R0Q54_RS08560 (R0Q54_08560)	pbpG	1587353..1589428 (+)	2076	WP_015384942.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45627.12 Da
• Isoelectric Point: 5.1503

>NTDB_id=894046 R0Q54_RS08535 WP_014481226.1 1583549..1584694(+) (rapF) [Bacillus subtilis strain J46]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=894046 R0Q54_RS08535 WP_014481226.1 1583549..1584694(+) (rapF) [Bacillus subtilis strain J46]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.738	100	0.997
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572