Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA2   Type   Machinery gene
Locus tag   CYJ98_RS10235 Genome accession   NZ_CP136962
Coordinates   2168601..2169296 (+) Length   231 a.a.
NCBI ID   WP_101756340.1    Uniprot ID   A0A9X7I527
Organism   Neisseria perflava strain UMB0023     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2163601..2174296
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CYJ98_RS10215 (CYJ98_010215) - 2164505..2165284 (+) 780 WP_070838804.1 exodeoxyribonuclease III -
  CYJ98_RS10220 (CYJ98_010220) - 2165271..2165615 (+) 345 WP_101756337.1 hypothetical protein -
  CYJ98_RS10225 (CYJ98_010225) - 2165626..2166159 (+) 534 WP_101756338.1 alpha/beta hydrolase -
  CYJ98_RS10230 (CYJ98_010230) - 2166319..2168430 (+) 2112 WP_101756339.1 TonB-dependent receptor -
  CYJ98_RS10235 (CYJ98_010235) dsbA2 2168601..2169296 (+) 696 WP_101756340.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  CYJ98_RS10240 (CYJ98_010240) - 2169438..2169737 (+) 300 WP_083306197.1 hypothetical protein -
  CYJ98_RS10245 (CYJ98_010245) ffh 2169840..2171210 (-) 1371 WP_101756341.1 signal recognition particle protein -
  CYJ98_RS10250 (CYJ98_010250) - 2171394..2172206 (+) 813 WP_003684009.1 cytochrome C assembly family protein -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 25357.92 Da        Isoelectric Point: 5.3625

>NTDB_id=893805 CYJ98_RS10235 WP_101756340.1 2168601..2169296(+) (dsbA2) [Neisseria perflava strain UMB0023]
MKLKTLALTSLTLLALAACGKQAETSVPADSAQSSASAPAAPAPLTEGVNYTVLSNLIPQQQAGKIEVLEFFGYFCPHCA
HLEPVLSEHIKTFKDDTYMRREHVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=893805 CYJ98_RS10235 WP_101756340.1 2168601..2169296(+) (dsbA2) [Neisseria perflava strain UMB0023]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTAACCCTGTTGGCATTGGCCGCTTGCGGCAAACAGGCTGAAACCAGTGT
TCCGGCAGATAGCGCCCAAAGCAGCGCATCCGCTCCGGCAGCGCCAGCCCCATTGACCGAAGGTGTCAATTACACCGTAT
TGTCCAATCTGATTCCGCAACAGCAGGCCGGCAAAATCGAAGTATTGGAATTCTTTGGCTACTTCTGCCCGCATTGCGCC
CATCTTGAGCCGGTTTTGAGCGAGCACATCAAAACGTTTAAAGACGATACCTATATGCGCCGGGAGCATGTTGTGTGGGG
TGATGAAATGAAACCTTTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAACCAAAAAATCAACTTGGCCGATACCGATACCCTGAAAAAATGGTTGTCTGAGCAAACCGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAAGCGCCCGAAAGCCAAGCACGTGCGGCTCAAATGGAAGAATTGACCAATAA
ATTCCAAATCAGCGGCACACCGACCGTGATCGTCGGCGGCAAATACCAAGTCGAATTTAAAGACTGGCAGTCCGGCATGA
CCACGATTGACCAACTGGTGGACAAAGTACGCGAAGAGCAGAAAAAACCGCAATAA

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(65-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

97.403

100

0.974
  dsbA1 Neisseria meningitidis MC58

70.815

100

0.714