Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   R3H37_RS06845 Genome accession   NZ_CP136948
Coordinates   1388640..1389449 (-) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Spyo01     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1383640..1394449
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R3H37_RS06835 (R3H37_06840) smc 1383965..1387504 (-) 3540 WP_330554613.1 chromosome segregation protein SMC -
  R3H37_RS06840 (R3H37_06845) rnc 1387505..1388197 (-) 693 WP_011284596.1 ribonuclease III -
  R3H37_RS06845 (R3H37_06850) vicX 1388640..1389449 (-) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  R3H37_RS06850 (R3H37_06855) vicK 1389453..1390805 (-) 1353 WP_002990673.1 cell wall metabolism sensor histidine kinase VicK Regulator
  R3H37_RS06855 (R3H37_06860) vicR 1390798..1391508 (-) 711 WP_002985645.1 response regulator YycF Regulator
  R3H37_RS06860 (R3H37_06865) - 1391670..1392704 (-) 1035 WP_161761900.1 DUF3114 domain-containing protein -
  R3H37_RS06865 (R3H37_06870) - 1392760..1394007 (-) 1248 WP_014407393.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=893614 R3H37_RS06845 WP_002985641.1 1388640..1389449(-) (vicX) [Streptococcus pyogenes strain Spyo01]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=893614 R3H37_RS06845 WP_002985641.1 1388640..1389449(-) (vicX) [Streptococcus pyogenes strain Spyo01]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758