Detailed information NTG0089359

Bioinformatically predicted

Overview

• Name: luxQ
• Type: Regulator
• Locus tag: OCU42_RS17280
• Genome accession: NZ_AP024906
• Coordinates: 490914..493499 (+)
• Length: 861 a.a.
• NCBI ID: WP_077333484.1
• Uniprot ID: A0A1R4LCW2
• Organism: Vibrio ruber strain LMG 23124
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 485914..498499

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCU42_RS17245	-	486030..486347 (-)	318	WP_074371103.1	DUF496 family protein	-
OCU42_RS17250	-	486573..486770 (+)	198	WP_077337563.1	hypothetical protein	-
OCU42_RS17255	-	486829..487479 (+)	651	WP_077337562.1	YceH family protein	-
OCU42_RS17260	-	487483..487776 (+)	294	WP_205409491.1	GIY-YIG nuclease family protein	-
OCU42_RS17265	traF	487852..488997 (+)	1146	WP_077337560.1	conjugal transfer protein TraF	-
OCU42_RS17270	tnpA	489178..489639 (+)	462	WP_261855949.1	IS200/IS605 family transposase	-
OCU42_RS17275	luxP	489787..490872 (+)	1086	WP_077333482.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
OCU42_RS17280	luxQ	490914..493499 (+)	2586	WP_077333484.1	LuxQ periplasmic sensor domain-containing protein	Regulator
OCU42_RS17285	-	493588..494115 (-)	528	WP_077333486.1	hypothetical protein	-
OCU42_RS17290	-	494292..495767 (+)	1476	WP_077333488.1	cobyric acid synthase	-
OCU42_RS17295	-	495810..496136 (-)	327	WP_139344000.1	hypothetical protein	-
OCU42_RS17300	-	496243..496455 (-)	213	WP_077333492.1	hypothetical protein	-

Sequence

Protein

• Length: 861 a.a.
• Molecular weight: 97285.64 Da
• Isoelectric Point: 5.3666

>NTDB_id=89359 OCU42_RS17280 WP_077333484.1 490914..493499(+) (luxQ) [Vibrio ruber strain LMG 23124]
MNVRPSPIRQKQKIATYFTRAITIIIAILTFSVLFQNYQISSQLIAQEVQRTANQTSGLVQGMVNFRLSLLKIHQDGSAT
NADLLHAVSSGKSQYIDQYFRAVDQLDPDNTPDVRFIAGLNHMLWDDGNAQFYGIVPNELESVSHRMVVNNAWMLVKIPS
LLETVYALARRTPLVSNQSGELIGYFYVMFVINNNYNLIEQIRTRSNSQNLILAIGSNVLSTTLNGEESYSEQDVLASQQ
NSDRLASYTVNTTELNVDENPTQLMIYAVQDNQNVVKLKRNFYYGVVFILVATTLFSFILWRWLHNRIRAEIEKLVQFSR
SIVDRGAEHVFHGSKIEEFDLFGRALEHTFKRLSEQEKQFENLFNFSIAPTILWGADGRLLRMNPAAVKQFSKDSQVATF
YELKERLIPSIKKASNGETLNEVATEFDSQIFRWTISPIVTEGRVESVLTQGQDVTTIAEAEKQSHLARSEAERAAGARA
DFLARMSHEVRTPLNGILGVSQLLKESVTDEKQLEQVGVLSLCSEHLLAVLNDILDFSKIEQNKFKLNPVHFHLIETVRV
IERIYQPLCQEKELGLDVMTNIQEDTIVVIDQIRLNQIIFNLLNNAIKFTREGEICVLINLNHSENGAMFHVSISDTGIG
IGHDDLTLIFEPFIQGGTTSSREFGGSGLGLSIVKNLVELMGGVVSVSSQVGKGSCFEFTIPIEVEQYRARHVKETIEQE
PSGQLFEQSPHVLLVEDNKTNAYIAKAFCDRFGLRVTWVEDGTVAVETLKKMGFDLILMDNQLPGMDGVEVTDFVKHQLR
LDTPIYACTADDTEKTKNDFLHAGAEYILVKPIREENLHQALVHFRDHYWEPVTSSVIQSH

Nucleotide

• Length: 2586 bp

>NTDB_id=89359 OCU42_RS17280 WP_077333484.1 490914..493499(+) (luxQ) [Vibrio ruber strain LMG 23124]
ATGAACGTCAGACCAAGCCCTATCAGACAGAAACAGAAGATAGCGACCTATTTTACCCGGGCGATCACCATTATCATTGC
CATCCTGACATTTAGTGTTCTGTTTCAAAATTATCAGATCAGTAGTCAGCTGATCGCTCAGGAAGTGCAACGAACGGCAA
ATCAGACCTCAGGGTTAGTTCAAGGCATGGTCAACTTCCGTCTTTCTTTGCTCAAAATTCATCAAGATGGTAGTGCGACC
AATGCTGATTTATTACATGCGGTAAGTTCCGGCAAGTCGCAGTATATCGATCAATATTTTCGTGCCGTTGACCAGCTTGA
CCCGGATAATACCCCGGATGTCCGCTTTATTGCCGGATTGAATCATATGCTGTGGGATGATGGTAATGCGCAGTTTTATG
GCATTGTGCCGAATGAATTGGAGTCTGTTTCACATCGCATGGTTGTCAATAATGCGTGGATGCTGGTGAAAATCCCATCT
TTGCTGGAAACGGTTTATGCTTTGGCCAGAAGAACCCCGCTAGTGAGTAATCAATCCGGTGAGCTGATTGGTTACTTTTA
CGTGATGTTTGTGATTAATAATAATTACAATCTTATCGAACAGATTCGCACTCGCAGTAATTCGCAAAATTTGATTCTGG
CGATCGGTTCAAACGTGTTGTCGACGACTCTCAACGGAGAAGAGTCATATTCAGAGCAGGATGTGCTCGCTTCCCAACAA
AATTCTGATCGACTGGCGTCTTATACGGTCAATACCACCGAACTGAATGTTGATGAAAATCCGACGCAACTGATGATTTA
TGCGGTTCAGGATAACCAGAATGTCGTCAAACTGAAGCGTAATTTTTATTACGGTGTGGTGTTTATTCTTGTGGCGACAA
CATTGTTCTCTTTTATCTTATGGCGTTGGTTGCACAATAGAATTCGTGCGGAGATTGAAAAACTGGTGCAGTTTAGCCGC
TCTATTGTTGATCGTGGAGCTGAGCATGTTTTTCATGGTTCAAAGATCGAGGAGTTTGATCTGTTCGGGCGGGCACTTGA
GCATACCTTTAAGCGCTTATCCGAACAAGAAAAGCAATTTGAGAATTTGTTTAATTTCTCGATTGCACCAACCATTTTAT
GGGGGGCCGACGGGCGTTTACTACGGATGAACCCCGCAGCGGTAAAACAGTTTTCAAAGGATAGTCAGGTCGCTACTTTT
TATGAGCTGAAAGAACGATTAATCCCTAGTATTAAAAAGGCGTCGAACGGAGAAACACTGAATGAAGTTGCGACTGAGTT
CGACAGTCAAATATTCCGCTGGACGATTTCCCCGATTGTGACGGAAGGCCGTGTCGAGTCAGTCCTGACTCAAGGGCAGG
ATGTCACCACCATTGCCGAAGCTGAGAAACAAAGTCACTTGGCCCGGAGTGAAGCAGAGAGAGCCGCTGGTGCCAGAGCT
GATTTTCTGGCTCGGATGAGCCATGAAGTCAGAACACCTTTAAACGGGATTTTGGGGGTGTCACAGTTATTAAAAGAGAG
TGTGACGGATGAAAAGCAGCTTGAACAGGTTGGGGTTCTCAGCTTATGTAGCGAACATCTGCTTGCTGTTTTGAATGATA
TTCTGGACTTCTCCAAGATCGAACAGAATAAATTCAAACTCAATCCGGTTCATTTCCACTTGATTGAAACGGTTCGGGTC
ATTGAACGGATTTATCAGCCATTGTGTCAGGAAAAGGAACTTGGGCTGGATGTCATGACCAATATTCAGGAAGATACCAT
CGTGGTTATTGATCAAATCCGTCTCAATCAAATTATCTTCAATTTACTGAATAACGCGATTAAATTTACCCGTGAAGGGG
AGATTTGTGTTCTGATCAATTTAAACCATTCTGAAAATGGTGCGATGTTCCATGTCTCCATTTCTGATACCGGTATTGGT
ATCGGGCATGATGATCTTACGTTGATCTTTGAACCTTTTATTCAGGGGGGAACGACCTCAAGCCGTGAGTTTGGTGGCAG
TGGTTTAGGATTATCGATTGTGAAAAATCTGGTGGAGCTCATGGGGGGCGTGGTGTCAGTTTCGTCTCAGGTCGGCAAAG
GAAGCTGCTTCGAGTTCACGATTCCGATTGAAGTTGAGCAATACCGTGCCAGACACGTAAAAGAAACAATTGAGCAGGAG
CCGTCAGGCCAGTTGTTTGAACAATCTCCGCATGTTTTGTTAGTCGAAGATAACAAAACCAATGCGTATATCGCGAAGGC
ATTTTGTGACCGTTTCGGATTGCGGGTGACATGGGTTGAGGATGGAACGGTTGCGGTTGAAACGCTGAAAAAAATGGGCT
TTGATTTAATTTTAATGGATAACCAGTTGCCGGGCATGGATGGTGTGGAAGTGACGGACTTTGTTAAACATCAGCTCAGA
CTAGACACGCCAATTTATGCATGTACTGCTGATGATACTGAAAAAACGAAGAATGATTTCTTACATGCAGGGGCAGAATA
CATACTGGTCAAACCGATTCGGGAAGAAAATTTACATCAAGCGCTGGTTCATTTCAGAGATCATTATTGGGAACCAGTGA
CGTCGAGTGTCATTCAGTCTCATTAG

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (732-842)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (591-704)

• His Kinase A (phospho-acceptor) domain (HisKA) (479-542)

• LuxQ, periplasmic (LuxQ-periplasm) (41-278)

3D structure

• AlphaFold DB: A0A1R4LCW2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxQ	Vibrio cholerae strain A1552	50.762	99.071	0.503