Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   RJD36_RS01235 Genome accession   NZ_CP136943
Coordinates   207258..208520 (+) Length   420 a.a.
NCBI ID   WP_013851436.1    Uniprot ID   A0AAE6YTS4
Organism   Streptococcus pasteurianus strain WUSP082     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 202258..213520
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RJD36_RS01210 (RJD36_01210) galE 203049..204047 (+) 999 WP_003063121.1 UDP-glucose 4-epimerase GalE -
  RJD36_RS01215 (RJD36_01215) - 204107..204966 (+) 860 Protein_188 GNAT family N-acetyltransferase -
  RJD36_RS01220 (RJD36_01220) yajC 205075..205446 (+) 372 WP_003063127.1 preprotein translocase subunit YajC -
  RJD36_RS01225 (RJD36_01225) - 205600..206349 (+) 750 WP_003063129.1 isoprenyl transferase -
  RJD36_RS01230 (RJD36_01230) - 206362..207156 (+) 795 WP_003063131.1 phosphatidate cytidylyltransferase -
  RJD36_RS01235 (RJD36_01235) eeP 207258..208520 (+) 1263 WP_013851436.1 RIP metalloprotease RseP Regulator
  RJD36_RS01240 (RJD36_01240) - 208682..210538 (+) 1857 WP_317751383.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 420 a.a.        Molecular weight: 45691.71 Da        Isoelectric Point: 4.4667

>NTDB_id=893526 RJD36_RS01235 WP_013851436.1 207258..208520(+) (eeP) [Streptococcus pasteurianus strain WUSP082]
MLGILTFIIVFGILVIVHEFGHLYFAKKSGILVREFSIGMGPKIFSHIDKEGTAYTIRILPLGGYVRMAGWGDDTTEIKT
GTPASLTLNQDGLVTRINLSQKQLDNTALPMNVTAYDLEDKLEITGLVLDETKTYSVDHDATIVEEDGTEIRIAPLDVQY
QNATVWGRLITNFAGPLNNFILGTIVFILLVFMQGGVQDTSTNVIQVTDGGAMQAAGVESGDRVLSIENYDISNWSDLTE
AVTKVTENISSGDTISVTVETSSGKTETLDITPQENNGSYYIGVTRVLKTGFWDKVTGGFQMAWQSATAILTALKGLISN
FSLDKLGGPVAMYQASSQAASNGLTSVLYLLALLSMNLGIVNLIPIPALDGGKILMNLIEIVRRKPLKQETETYITLVGV
VIMLVLMIAVTWNDIMRVFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=893526 RJD36_RS01235 WP_013851436.1 207258..208520(+) (eeP) [Streptococcus pasteurianus strain WUSP082]
ATGCTCGGAATTTTAACCTTTATTATCGTTTTTGGAATTTTAGTTATTGTCCATGAATTTGGGCACCTTTACTTTGCTAA
AAAGTCTGGCATCTTAGTACGAGAATTTTCTATCGGAATGGGCCCGAAAATCTTTTCGCATATTGATAAAGAGGGTACCG
CTTATACAATTCGTATCCTACCTCTGGGTGGCTATGTACGCATGGCTGGTTGGGGTGATGATACGACGGAAATCAAGACT
GGAACGCCTGCCAGTTTGACACTAAATCAAGACGGTTTAGTGACACGTATTAATTTATCACAAAAGCAGTTGGACAACAC
CGCTCTTCCGATGAATGTCACAGCTTATGATTTAGAGGATAAGTTGGAAATCACAGGTCTAGTGCTTGATGAAACGAAAA
CCTATTCTGTTGACCATGATGCGACTATTGTCGAGGAAGATGGTACAGAAATCCGTATTGCACCGCTAGATGTACAATAT
CAAAATGCAACAGTTTGGGGACGTTTAATCACAAACTTTGCTGGTCCGTTGAATAACTTTATTTTGGGAACAATTGTCTT
TATCCTTCTTGTTTTCATGCAAGGTGGTGTTCAAGATACGTCAACGAATGTTATTCAAGTAACTGACGGTGGTGCCATGC
AGGCAGCTGGTGTTGAAAGTGGTGACCGTGTCTTATCCATCGAAAATTATGACATCTCTAATTGGTCTGATTTGACGGAG
GCTGTCACAAAAGTAACTGAAAATATTTCAAGTGGTGATACGATTTCCGTAACCGTTGAAACCAGCTCAGGAAAGACTGA
AACGCTGGATATAACACCACAAGAAAATAATGGAAGTTACTATATCGGTGTCACTCGAGTATTGAAAACAGGTTTCTGGG
ACAAGGTCACTGGTGGCTTCCAAATGGCTTGGCAAAGCGCGACAGCTATTCTGACAGCTTTGAAAGGCTTGATTTCAAAC
TTTAGTTTGGATAAATTAGGTGGTCCTGTTGCCATGTATCAAGCTTCAAGTCAAGCTGCTTCAAATGGATTGACTTCAGT
TCTTTATTTATTGGCGCTATTGTCAATGAACTTAGGAATTGTGAATTTGATTCCGATTCCAGCCTTGGACGGTGGAAAAA
TTTTGATGAACCTTATCGAAATTGTTCGTCGTAAACCGCTTAAACAAGAAACCGAAACTTACATCACCCTAGTTGGCGTT
GTTATCATGCTTGTTTTGATGATTGCTGTCACTTGGAACGATATTATGCGAGTTTTCTTTTAG

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-406)

PDZ domain (PDZ_2)

(201-271)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

69.762

100

0.698
  eeP Streptococcus thermophilus LMG 18311

69.524

100

0.695