Detailed information NTG0089327

Bioinformatically predicted

Overview

• Name: luxQ
• Type: Regulator
• Locus tag: OCV37_RS17790
• Genome accession: NZ_AP024904
• Coordinates: 604769..607351 (-)
• Length: 860 a.a.
• NCBI ID: WP_038184884.1
• Uniprot ID: -
• Organism: Vibrio rhizosphaerae strain LMG 23790
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 599769..612351

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCV37_RS17765	-	601460..601684 (-)	225	WP_038184888.1	hypothetical protein	-
OCV37_RS17770	-	601784..601996 (+)	213	WP_038184887.1	hypothetical protein	-
OCV37_RS17775	-	602111..602440 (+)	330	WP_038185224.1	hypothetical protein	-
OCV37_RS17780	-	602486..603964 (-)	1479	WP_038185222.1	cobyric acid synthase	-
OCV37_RS17785	-	604145..604672 (+)	528	WP_038184885.1	hypothetical protein	-
OCV37_RS17790	luxQ	604769..607351 (-)	2583	WP_038184884.1	LuxQ periplasmic sensor domain-containing protein	Regulator
OCV37_RS17795	luxP	607388..608470 (-)	1083	WP_038184883.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
OCV37_RS17800	traF	608548..609693 (-)	1146	WP_038184881.1	conjugal transfer protein TraF	-
OCV37_RS17805	-	609770..610060 (-)	291	WP_038184879.1	GIY-YIG nuclease family protein	-
OCV37_RS17810	-	610067..610717 (-)	651	WP_038185218.1	YceH family protein	-
OCV37_RS17815	-	611197..611514 (+)	318	WP_021018699.1	DUF496 family protein	-
OCV37_RS17820	-	611754..612227 (+)	474	WP_038184870.1	peroxiredoxin	-

Sequence

Protein

• Length: 860 a.a.
• Molecular weight: 97367.81 Da
• Isoelectric Point: 5.5105

>NTDB_id=89327 OCV37_RS17790 WP_038184884.1 604769..607351(-) (luxQ) [Vibrio rhizosphaerae strain LMG 23790]
MNVRPSPIRQKQKIATYFTRAITIIIVILTFSVLFQNYQISSQLIAQEVQRTANQTSGLVQGMLNFRLSLLKIHQDSSAT
NADLLHAVSSGKSQYIDQYFRSVDQLDPDNTPDVRFIAGLNHMLWDDGNAQFYGIVPNELESVSHRMAVNNAWMLVKIPS
LLETVYALARRTPLVSHSGELIGYLYVMFVINNNYNLIEQIRARSHSQNLILAIGSNVLSTTLNGEESYSEQDVLAHPQH
SDRLESYTVNTTELNVDENPTQLIMYAVQDNQNVVKLKRNFYYGVVFILVATALFSFILWRWLHKRIRAEIEKLVQFSRS
IVDRGGEHVFHGSKIEEFDLFGRALEHTFKRLSEQEKQFENLFNFSIAPTILWGADGRLLRMNPAAVKQFSKESEVSAFY
ELKERLIPSIKKASNGETLKEVATEFDNQIFRWTISPIVTESRIESVLTQGQDVTTIAEAEKQSHLARSEAERAAGARAD
FLARMSHEVRTPLNGILGVSQLLKESVTDEKQREQVGVLSLCSEHLLAVLNDILDFSKIEQNKFKLNPVHFHLIETVRVI
ERIYQPLCQEKELELDVMTNIQEETIVVIDQIRLNQIIFNLLNNAIKFTRAGEICVLINLNHSEEGAMFHVSVSDTGIGI
GHDELLLIFEPFIQGGTTSNREFGGSGLGLSIVKNLVELMGGSVSVSSQVGKGSCFEFTIPIEVEQYHVKQAEEPVEQSS
SDQLFEQSPHVLLVEDNKTNAYIAKAFCDRFGLRVTWVEDGTAAVETLKKIGFDLILMDNQLPGMDGVEVTDFVKHQLRL
DTPIYACTADDTEKTKNDFLHAGAEYILVKPIREENLYKALLHFRDHYWTPVTSSVLQSH

Nucleotide

• Length: 2583 bp

>NTDB_id=89327 OCV37_RS17790 WP_038184884.1 604769..607351(-) (luxQ) [Vibrio rhizosphaerae strain LMG 23790]
ATGAACGTCAGACCGAGCCCTATTCGTCAGAAACAGAAAATAGCAACCTATTTTACTCGGGCAATTACCATTATTATTGT
CATTCTGACATTTAGTGTCCTGTTTCAGAACTATCAGATCAGTAGTCAGTTAATCGCTCAGGAAGTGCAGCGAACGGCAA
ATCAGACCTCAGGATTAGTTCAGGGGATGCTCAACTTCCGTCTTTCTTTACTCAAAATCCATCAAGACAGCAGTGCGACC
AATGCTGATTTATTACATGCGGTAAGCTCTGGCAAGTCGCAGTATATTGATCAATATTTTCGTTCTGTAGATCAGCTTGA
TCCCGATAATACACCGGATGTCCGTTTTATCGCGGGTTTAAATCATATGCTGTGGGATGACGGAAATGCTCAGTTCTACG
GCATTGTACCGAATGAATTGGAATCTGTTTCACACCGGATGGCGGTGAACAATGCATGGATGTTGGTGAAAATACCATCT
TTGCTGGAGACGGTTTATGCACTGGCCAGAAGAACGCCACTTGTGAGCCATTCGGGTGAACTGATCGGTTACTTGTATGT
GATGTTTGTGATTAATAATAATTACAATCTTATCGAACAGATTCGCGCTCGCAGTCATTCGCAGAATCTGATTCTTGCTA
TCGGGTCGAATGTGCTTTCGACGACTCTCAACGGCGAAGAGTCATACTCAGAACAGGATGTTCTGGCTCACCCGCAACAC
TCTGATCGGCTTGAATCCTATACGGTCAATACCACGGAGCTGAATGTCGATGAGAATCCGACCCAACTGATCATGTATGC
CGTTCAGGACAATCAGAATGTGGTCAAACTGAAGCGTAATTTTTATTACGGTGTCGTATTCATTCTTGTTGCGACCGCGT
TGTTTTCTTTTATCTTATGGCGATGGTTACATAAGCGAATTCGGGCTGAGATTGAAAAGTTAGTGCAGTTTAGTCGCTCA
ATTGTGGACCGTGGCGGGGAACATGTTTTCCATGGTTCAAAGATCGAGGAATTTGACCTGTTCGGGCGAGCACTTGAACA
CACCTTTAAGCGTTTATCCGAACAAGAAAAGCAATTTGAGAATTTGTTCAACTTCTCAATTGCACCAACGATTTTATGGG
GGGCTGATGGCCGTCTACTGCGGATGAATCCCGCTGCAGTGAAGCAATTTTCCAAGGAAAGTGAGGTTTCAGCGTTTTAT
GAATTGAAAGAGCGGTTAATTCCCAGCATCAAAAAGGCGTCCAATGGTGAGACGCTAAAAGAAGTTGCGACAGAATTTGA
CAATCAAATCTTCCGCTGGACGATTTCTCCGATTGTGACCGAAAGCCGTATCGAGTCTGTTCTGACGCAAGGGCAGGATG
TCACGACAATTGCTGAGGCTGAGAAACAAAGCCATTTAGCGAGGAGTGAAGCAGAAAGAGCGGCTGGTGCCAGAGCTGAT
TTTCTGGCTCGGATGAGCCATGAGGTCAGAACGCCTTTAAATGGGATTTTGGGGGTCTCACAGTTATTGAAGGAGAGTGT
GACGGATGAAAAGCAGCGTGAACAGGTCGGTGTCCTCAGTTTATGTAGCGAGCATCTGCTTGCCGTTTTGAATGATATTC
TTGATTTCTCCAAGATTGAACAGAATAAGTTCAAACTAAATCCGGTTCATTTCCACTTGATTGAGACGGTCCGTGTGATT
GAACGAATCTATCAGCCATTATGTCAGGAAAAGGAACTTGAGCTGGATGTGATGACCAATATTCAGGAAGAGACCATCGT
TGTTATTGACCAAATCCGTTTGAATCAAATCATCTTTAATTTGCTGAACAACGCGATTAAATTTACCCGAGCGGGTGAGA
TCTGTGTCCTGATTAATTTAAACCATTCGGAAGAAGGCGCGATGTTCCATGTTTCCGTCTCCGATACCGGTATTGGCATT
GGACATGATGAACTTTTGTTGATTTTTGAACCCTTTATTCAAGGGGGAACAACATCGAACCGTGAGTTCGGTGGGAGTGG
TTTAGGGCTATCGATTGTGAAAAATTTGGTAGAACTGATGGGGGGATCGGTGTCGGTCTCTTCTCAGGTCGGCAAAGGCA
GCTGCTTTGAGTTCACCATTCCGATTGAGGTTGAACAATATCACGTTAAACAAGCAGAAGAACCCGTTGAACAAAGTTCC
TCAGACCAGCTATTTGAGCAATCTCCTCACGTTTTATTAGTTGAAGATAACAAGACCAATGCTTATATCGCCAAGGCATT
TTGTGATCGTTTTGGCTTGCGGGTGACATGGGTTGAAGACGGCACAGCGGCCGTGGAAACACTGAAAAAAATTGGTTTTG
ATTTGATTCTGATGGATAACCAGTTGCCGGGCATGGATGGGGTTGAAGTCACCGACTTCGTCAAACATCAACTCAGGCTG
GATACACCCATTTATGCATGTACTGCCGATGATACTGAAAAAACCAAGAATGATTTCTTACATGCCGGGGCAGAATACAT
TCTGGTCAAACCGATTCGCGAAGAGAATCTATATAAGGCACTGCTTCATTTCCGGGATCATTATTGGACGCCAGTGACGT
CGAGTGTACTTCAGTCTCATTAG

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (731-841)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (590-703)

• His Kinase A (phospho-acceptor) domain (HisKA) (478-541)

• LuxQ, periplasmic (LuxQ-periplasm) (41-277)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxQ	Vibrio cholerae strain A1552	51.174	99.07	0.507