Detailed information NTG0893192

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: R0137_RS14760
• Genome accession: NZ_CP136865
• Coordinates: 3332673..3334055 (+)
• Length: 460 a.a.
• NCBI ID: WP_407327161.1
• Uniprot ID: -
• Organism: Congregibacter brevis strain IMCC45268
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3327673..3339055

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R0137_RS14745 (R0137_14705)	-	3328373..3329284 (+)	912	WP_407327158.1	outer membrane protein assembly factor BamD	-
R0137_RS14750 (R0137_14710)	-	3329291..3330913 (-)	1623	WP_407327159.1	NAD+ synthase	-
R0137_RS14755 (R0137_14715)	-	3331047..3332666 (+)	1620	WP_407327160.1	sensor histidine kinase	-
R0137_RS14760 (R0137_14720)	pilR	3332673..3334055 (+)	1383	WP_407327161.1	sigma-54-dependent transcriptional regulator	Regulator
R0137_RS14765 (R0137_14725)	-	3334136..3334795 (+)	660	WP_407327162.1	GspH/FimT family pseudopilin	-
R0137_RS14770 (R0137_14730)	-	3334792..3335127 (-)	336	WP_407327163.1	hypothetical protein	-
R0137_RS14775 (R0137_14735)	-	3335133..3335594 (-)	462	WP_407327164.1	type IV pilin protein	-

Sequence

Protein

• Length: 460 a.a.
• Molecular weight: 50091.98 Da
• Isoelectric Point: 4.7247

>NTDB_id=893192 R0137_RS14760 WP_407327161.1 3332673..3334055(+) (pilR) [Congregibacter brevis strain IMCC45268]
MSNSQTARVLIVDDEPDIRELLEITLGRMGLDTVSAANLREAYQLLDDENPLQLCLTDMRLPDGNGIELVEHIQATQPSL
PVAMITAHGNVDSAIRALKAGAFDFISKPVALEKLRSLISAALELDPIDAAGDVSDDNELIGETHQMDKLRTQIAKLARS
QAPVHIRGESGSGKEVVARNIHGKGPRAAGPFVAVNCGAIPAELIESELFGHLKGSFTGASRDKLGLFQAAEGGTLFLDE
VADLPLAMQVKLLRAIQEKRVRPVGANEEVATDVRLLSATHKSLAKEVAEGRFREDLFFRVNVIELEVPSLRERKDDLPV
LSRALIKRIADAHHSEIPAISPAAIATMNNYQFPGNVRELENMLERAFALCEADVIDAEDLQIGSIETPITSAALEKSDA
KGSQLNEVAGDLDGYLADIERGILSEALDAHRWNRTETAKALGVSFRSLRYRMKKLELDD

Nucleotide

• Length: 1383 bp

>NTDB_id=893192 R0137_RS14760 WP_407327161.1 3332673..3334055(+) (pilR) [Congregibacter brevis strain IMCC45268]
TTGAGCAATAGTCAAACCGCTAGAGTGCTCATCGTGGATGATGAGCCCGACATTCGAGAGCTTTTGGAGATAACCCTTGG
TCGTATGGGATTGGATACCGTCAGCGCCGCCAACCTCAGGGAAGCCTATCAACTACTGGATGACGAAAATCCCCTTCAAC
TCTGCCTAACCGACATGCGTTTGCCTGACGGAAACGGCATAGAGCTTGTAGAACATATTCAGGCGACGCAGCCCTCCCTA
CCCGTGGCCATGATTACCGCGCATGGTAATGTTGATAGCGCCATTCGGGCACTGAAAGCCGGTGCGTTCGATTTTATTAG
TAAGCCTGTGGCTCTGGAAAAGCTTCGCTCTCTCATCAGCGCTGCTTTGGAACTTGATCCCATTGATGCCGCGGGTGATG
TCTCGGATGATAACGAGCTCATCGGCGAAACTCACCAGATGGATAAGCTTCGCACGCAGATTGCCAAGCTTGCCCGAAGC
CAAGCGCCAGTGCACATACGAGGCGAATCCGGCAGTGGTAAGGAAGTGGTCGCACGGAACATCCATGGCAAAGGACCAAG
AGCTGCAGGCCCCTTCGTCGCCGTTAACTGCGGCGCGATACCCGCAGAACTTATTGAAAGTGAGCTCTTTGGGCATCTCA
AAGGAAGCTTCACGGGCGCGAGTCGTGACAAGCTCGGCTTGTTCCAAGCTGCGGAGGGCGGGACTTTGTTTTTGGACGAA
GTTGCAGATTTACCGCTTGCCATGCAGGTAAAGCTTTTGCGGGCGATTCAAGAAAAACGTGTGCGTCCCGTGGGCGCAAA
CGAGGAGGTAGCTACCGATGTGCGCTTGCTCTCCGCCACCCATAAGAGTCTCGCTAAGGAAGTAGCCGAGGGCCGTTTTC
GTGAGGATCTGTTCTTTAGGGTAAACGTTATCGAACTTGAGGTCCCTAGCCTCAGAGAGAGAAAGGATGACCTGCCTGTG
CTTTCGCGGGCTCTCATCAAACGGATTGCAGACGCCCATCATAGCGAGATCCCTGCTATTAGCCCTGCAGCGATAGCCAC
GATGAATAACTATCAATTCCCGGGCAATGTACGGGAACTGGAAAACATGCTCGAACGTGCCTTCGCATTGTGCGAGGCCG
ATGTGATCGACGCAGAAGACCTTCAAATAGGCAGTATCGAAACGCCCATAACATCGGCAGCGCTCGAGAAATCGGACGCC
AAAGGCAGCCAGCTAAACGAGGTTGCTGGGGACCTCGATGGCTACTTGGCCGATATCGAACGGGGGATACTCAGTGAGGC
GCTGGATGCTCATCGCTGGAATCGAACGGAGACCGCGAAAGCTCTTGGCGTAAGCTTCAGGAGTCTTCGGTATCGAATGA
AGAAGCTGGAGCTTGATGATTGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

• Bacterial regulatory protein, Fis family (HTH_8) (416-456)

• Response regulator receiver domain (Response_reg) (9-119)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	60.619	98.261	0.596
pilR	Acinetobacter baumannii strain A118	48.06	100	0.485