Detailed information NTG0892883

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: ABDT56_RS19895
• Genome accession: NZ_CP152467
• Coordinates: 4054050..4055459 (-)
• Length: 469 a.a.
• NCBI ID: WP_001188777.1
• Uniprot ID: Q32A39
• Organism: Escherichia coli strain Sel(aux star)
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 4049050..4060459

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABDT56_RS19870	yihA	4050314..4050946 (-)	633	WP_000183349.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
ABDT56_RS19875	-	4051243..4051409 (+)	167	Protein_3871	hypothetical protein	-
ABDT56_RS19880	yihI	4051528..4052037 (+)	510	WP_001295266.1	Der GTPase-activating protein YihI	-
ABDT56_RS19885	hemN	4052226..4053599 (+)	1374	WP_000116090.1	oxygen-independent coproporphyrinogen III oxidase	-
ABDT56_RS19890	yshB	4053828..4053938 (-)	111	WP_000893994.1	YshB family small membrane protein	-
ABDT56_RS19895	luxO	4054050..4055459 (-)	1410	WP_001188777.1	nitrogen regulation protein NR(I)	Regulator
ABDT56_RS19900	glnL	4055471..4056520 (-)	1050	WP_000190577.1	nitrogen regulation protein NR(II)	-
ABDT56_RS19905	glnA	4056806..4058215 (-)	1410	WP_001271717.1	glutamate--ammonia ligase	-
ABDT56_RS19910	typA	4058588..4060411 (+)	1824	WP_000570668.1	ribosome-dependent GTPase TypA	-

Sequence

Protein

• Length: 469 a.a.
• Molecular weight: 52254.74 Da
• Isoelectric Point: 6.4561

>NTDB_id=892883 ABDT56_RS19895 WP_001188777.1 4054050..4055459(-) (luxO) [Escherichia coli strain Sel(aux star)]
MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVII
MTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQQQPRNVQLNGPTTDIIGEAPAMQDVFRIIGRLSRS
SISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDE
IGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPR
LARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESTVAESTSQMQPD
SWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGME

Nucleotide

• Length: 1410 bp

>NTDB_id=892883 ABDT56_RS19895 WP_001188777.1 4054050..4055459(-) (luxO) [Escherichia coli strain Sel(aux star)]
ATGCAACGAGGGATAGTCTGGGTAGTCGATGACGATAGTTCCATCCGTTGGGTGCTTGAACGTGCGCTCGCTGGGGCAGG
TTTAACCTGTACGACGTTTGAGAACGGCGCAGAAGTGCTGGAGGCGCTGGCGAGCAAAACGCCGGATGTGCTGCTTTCAG
ATATCCGTATGCCGGGAATGGACGGGCTGGCGCTGCTCAAGCAGATTAAACAGCGCCATCCAATGCTTCCGGTCATCATT
ATGACCGCACATTCCGATCTGGATGCTGCCGTCAGCGCCTATCAACAAGGGGCGTTTGATTATCTGCCCAAACCGTTTGA
TATCGACGAAGCAGTGGCGCTGGTTGAGCGCGCTATCAGTCATTACCAGGAACAGCAGCAGCCGCGTAATGTTCAGCTTA
ACGGCCCAACGACCGATATCATCGGCGAAGCGCCAGCCATGCAGGACGTGTTCCGTATTATCGGTCGGCTTTCGCGTTCT
TCTATTAGCGTGCTGATTAACGGCGAATCCGGCACCGGTAAAGAACTGGTCGCTCATGCCCTGCATCGCCACAGTCCGCG
CGCCAAAGCGCCGTTTATCGCGCTGAATATGGCAGCTATCCCAAAAGATTTGATCGAATCAGAACTGTTTGGCCACGAGA
AAGGCGCGTTTACTGGCGCGAATACCATTCGTCAGGGGCGTTTTGAACAGGCCGATGGCGGTACATTATTCCTCGACGAA
ATTGGTGATATGCCGCTGGATGTGCAGACGCGTTTGCTGCGCGTGCTGGCAGACGGTCAGTTTTACCGCGTTGGCGGCTA
TGCGCCGGTGAAAGTGGATGTGCGGATTATCGCTGCCACTCACCAGAATCTCGAACAGCGAGTGCAGGAAGGTAAGTTCC
GTGAGGATCTGTTCCACCGCCTGAACGTTATCCGCGTTCATCTGCCGCCGCTGCGCGAACGTCGGGAAGATATTCCCCGT
CTGGCGCGCCATTTTTTACAGGTTGCCGCGCGCGAACTGGGCGTAGAAGCGAAGTTACTGCATCCGGAAACCGAAGCTGC
TCTGACGCGTCTGGCGTGGCCAGGCAACGTGCGCCAGCTGGAAAACACCTGCCGCTGGCTAACGGTGATGGCCGCCGGGC
AGGAAGTGTTGATTCAGGATTTGCCCGGCGAACTGTTTGAATCAACGGTTGCGGAGAGTACTTCGCAAATGCAACCGGAC
AGCTGGGCGACGCTTCTTGCGCAGTGGGCAGACAGAGCGCTGCGTTCCGGTCATCAAAATCTGCTTTCCGAAGCGCAGCC
AGAGCTGGAGCGGACGTTACTGACGACCGCGTTGCGACATACGCAGGGGCATAAACAGGAAGCGGCGCGGCTACTCGGCT
GGGGCCGCAACACCCTGACGCGTAAGTTAAAAGAGCTGGGGATGGAGTGA

Domains

Predicted by InterProScan.

• Bacterial regulatory protein, Fis family (HTH_8) (427-466)

• Response regulator receiver domain (Response_reg) (6-115)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

3D structure

• AlphaFold DB: Q32A39

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	39.871	98.934	0.394
pilR	Pseudomonas aeruginosa PAK	39.066	100	0.392