Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   RYQ61_RS02520 Genome accession   NZ_CP136799
Coordinates   495127..496398 (-) Length   423 a.a.
NCBI ID   WP_020999183.1    Uniprot ID   -
Organism   Streptococcus intermedius strain XH2169     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 490127..501398
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RYQ61_RS02505 (RYQ61_02505) - 490836..492140 (-) 1305 WP_317289760.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  RYQ61_RS02510 (RYQ61_02510) - 492342..492980 (-) 639 WP_117276900.1 CPBP family intramembrane metalloprotease -
  RYQ61_RS02515 (RYQ61_02515) - 493234..495093 (-) 1860 WP_102568319.1 proline--tRNA ligase -
  RYQ61_RS02520 (RYQ61_02520) eeP 495127..496398 (-) 1272 WP_020999183.1 RIP metalloprotease Regulator
  RYQ61_RS02525 (RYQ61_02525) - 496550..497353 (-) 804 WP_020999184.1 phosphatidate cytidylyltransferase -
  RYQ61_RS02530 (RYQ61_02530) - 497362..498111 (-) 750 WP_003074042.1 isoprenyl transferase -
  RYQ61_RS02535 (RYQ61_02535) yajC 498575..498913 (-) 339 WP_003074039.1 preprotein translocase subunit YajC -

Sequence

Protein


Download         Length: 423 a.a.        Molecular weight: 45774.60 Da        Isoelectric Point: 9.6561

>NTDB_id=892702 RYQ61_RS02520 WP_020999183.1 495127..496398(-) (eeP) [Streptococcus intermedius strain XH2169]
MQAGIIGIVTFIIIFGIIVVVHEFGHFYFAKKSGILVREFSIGMGPKIFAHIGKDGTAYTIRMLPLGGYVRMAGWGEDST
EIKTGTPASLSLNEAGKVIRINLSGKKIDQTALPMNVTSFDLENRLEIAGLVLDEQKTYAVDHDATIVEEDGTEIRIAPL
DVQYQNASLGGRLITNFAGPMNNFILGIVAFLLLIFMQGGVADQHTNHVRILQGSVLAQAGVKNNDQILKVGQAEIKNWS
DLTQAVQSETKASKGQAELTITVKSGNKIQKLTVKPKKEQGRYLLGVMPGLKSDLPSMIAGGFSMAWNASFRIFAALKNL
IFHPDINKLGGPVAIYKASSDAAKGGLESVIALLAMLSLNIGIFNLIPIPALDGGKIVLNLLEAIRRKPLKQETETYVTL
AGVAVMVVLLIAVTWNDIMRTFF

Nucleotide


Download         Length: 1272 bp        

>NTDB_id=892702 RYQ61_RS02520 WP_020999183.1 495127..496398(-) (eeP) [Streptococcus intermedius strain XH2169]
ATGCAAGCAGGTATTATAGGAATCGTTACCTTTATCATTATTTTTGGAATAATCGTTGTTGTTCATGAATTTGGGCATTT
CTATTTTGCGAAAAAATCAGGCATTTTGGTGCGCGAGTTTTCCATTGGAATGGGTCCGAAAATTTTTGCTCATATTGGCA
AAGATGGGACAGCATATACTATTCGGATGTTACCGCTTGGTGGATATGTCCGTATGGCTGGCTGGGGTGAAGACTCAACT
GAGATTAAAACAGGCACACCTGCTAGTTTATCTTTGAATGAAGCAGGAAAGGTTATCCGGATTAATCTTTCAGGCAAGAA
AATCGATCAGACGGCCCTACCGATGAATGTGACGAGTTTTGATTTGGAAAATAGACTTGAAATTGCGGGTCTGGTTCTAG
ATGAGCAGAAGACTTATGCAGTCGACCATGATGCAACCATCGTAGAAGAAGATGGAACAGAAATACGCATTGCTCCGCTC
GATGTTCAATATCAAAATGCTAGTTTAGGTGGTCGTCTCATTACCAACTTTGCGGGACCAATGAACAATTTCATTTTGGG
GATTGTAGCTTTTTTGCTGTTGATTTTTATGCAGGGTGGTGTTGCAGATCAACATACAAACCATGTTCGGATTTTACAGG
GTAGTGTCCTAGCTCAAGCCGGTGTAAAAAATAATGACCAAATTTTAAAAGTTGGTCAAGCAGAGATCAAGAATTGGTCA
GATTTGACTCAAGCTGTTCAGTCTGAGACGAAAGCTAGCAAAGGACAGGCAGAACTAACCATAACTGTTAAAAGTGGAAA
TAAAATTCAAAAGCTTACAGTTAAGCCCAAAAAAGAGCAAGGCAGATATTTATTAGGAGTAATGCCAGGCTTGAAGTCGG
ATCTTCCATCGATGATCGCAGGTGGGTTTAGCATGGCTTGGAATGCTAGCTTCCGCATCTTTGCAGCTTTGAAAAATTTG
ATTTTCCACCCAGATATCAATAAATTGGGGGGGCCTGTGGCCATTTACAAAGCTAGTAGTGATGCTGCCAAAGGTGGGCT
TGAAAGTGTTATCGCTCTATTGGCTATGCTTTCTCTAAACATCGGTATTTTTAATCTCATTCCTATTCCCGCACTTGATG
GTGGAAAGATTGTTCTCAACCTTCTTGAAGCTATTCGTCGCAAACCATTAAAGCAGGAGACAGAAACCTATGTCACTTTA
GCAGGTGTTGCTGTTATGGTGGTGCTGTTAATTGCAGTCACGTGGAATGATATTATGCGAACCTTTTTTTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(10-409)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

64.593

98.818

0.638
  eeP Streptococcus thermophilus LMD-9

64.354

98.818

0.636