Detailed information NTG0892252

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: R0492_RS19050
• Genome accession: NZ_CP136649
• Coordinates: 3625971..3627128 (-)
• Length: 385 a.a.
• NCBI ID: WP_003185733.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain NXU98
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3620971..3632128

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R0492_RS19020	-	3621215..3621634 (-)	420	WP_003185715.1	TIGR03826 family flagellar region protein	-
R0492_RS19025	comFC	3621693..3622427 (-)	735	WP_011198352.1	amidophosphoribosyltransferase	Machinery gene
R0492_RS19030	-	3622384..3622668 (-)	285	WP_003185718.1	late competence development ComFB family protein	-
R0492_RS19035	comFA	3622723..3624117 (-)	1395	WP_003185720.1	DEAD/DEAH box helicase	Machinery gene
R0492_RS19040	-	3624238..3625080 (-)	843	WP_003185726.1	DegV family protein	-
R0492_RS19045	degU	3625200..3625889 (-)	690	WP_003185730.1	two-component system response regulator DegU	Regulator
R0492_RS19050	degS	3625971..3627128 (-)	1158	WP_003185733.1	histidine kinase	Regulator
R0492_RS19055	-	3627342..3627980 (+)	639	WP_003185736.1	YigZ family protein	-
R0492_RS19060	-	3627995..3629071 (+)	1077	WP_003185737.1	LCP family protein	-
R0492_RS19065	-	3629156..3629530 (-)	375	WP_025806150.1	hypothetical protein	-
R0492_RS19070	-	3629650..3630714 (-)	1065	WP_003185739.1	glycosyltransferase family 4 protein	-
R0492_RS19075	tuaH	3630845..3632026 (-)	1182	WP_011198354.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44636.36 Da
• Isoelectric Point: 6.7863

>NTDB_id=892252 R0492_RS19050 WP_003185733.1 3625971..3627128(-) (degS) [Bacillus licheniformis strain NXU98]
MSVSKMDSKVLDSIIMKMLKTVDGSKDEVFQIGEQSRQQYEGLVEELKQIKQQVNEVIDLGDRLEVHARHARNRLSEVSR
NFHKFSEEEIREAYEKAHKLQVELTMIQQREKQLREKRDDLERRLLGLQEIIERSEGLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDKGTEEGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEDYHGKAKIHFQCIGESEERRIAPRFEVALFRLAQEAVTNALKHSESTEIHVKVEV
TKDFVTLIIKDNGNGFDLKEVKGKKNKSFGLLGMKERVDLLEGSMTIDSKIGLGTFILIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=892252 R0492_RS19050 WP_003185733.1 3625971..3627128(-) (degS) [Bacillus licheniformis strain NXU98]
GTGAGCGTTTCCAAAATGGACTCCAAAGTTTTAGATTCAATCATTATGAAGATGTTAAAAACGGTTGACGGGAGCAAGGA
TGAAGTCTTTCAAATCGGAGAGCAGTCCCGCCAGCAATACGAAGGCTTGGTAGAAGAGCTGAAACAGATTAAACAGCAGG
TCAACGAAGTCATCGATCTTGGAGACAGGCTGGAAGTGCATGCCCGCCATGCGCGGAACCGCTTGTCAGAGGTCAGCAGA
AACTTTCATAAATTCAGTGAAGAAGAGATTCGCGAAGCTTATGAAAAAGCCCACAAACTGCAGGTTGAACTGACAATGAT
CCAGCAGCGGGAAAAGCAGCTGAGAGAGAAGCGTGATGATCTGGAACGGCGCCTTTTGGGGCTTCAGGAAATCATCGAGC
GTTCAGAAGGGCTTGTCAGTCAGATTACCGTCGTCTTAAACTACTTAAATCAGGATCTGCGCCAGGTCGGCGTTCTCCTT
GAAGATGCGCAGGCCAAGCAGGATTTCGGACTGCGGATTATCGAAGCCCAGGAGGAAGAAAGAAAAAGGGTCTCAAGGGA
AATTCACGACGGTCCTGCGCAAATGCTGGCCAACGTTATGATGAGATCTGAACTGATCGAACGCATCTTCAGAGACAAAG
GAACAGAAGAAGGCTTTCAGGAAATTAAAAACCTCCGGCAAAACGTCAGAAATGCTCTTTATGAAGTCAGAAGAATCATT
TATGATTTAAGGCCGATGGCTTTAGACGATTTGGGATTGATACCGACGCTCAGAAAATACTTGAACACGATCGAAGATTA
TCATGGAAAAGCAAAGATTCATTTCCAATGCATCGGAGAATCCGAAGAAAGAAGAATAGCACCGCGGTTTGAGGTTGCAC
TATTCCGGCTTGCACAGGAAGCGGTGACAAACGCCTTAAAACACTCCGAATCAACTGAAATTCATGTTAAAGTAGAAGTG
ACAAAAGATTTTGTGACGCTGATTATCAAAGACAATGGAAACGGCTTTGACTTAAAAGAAGTAAAAGGCAAGAAGAACAA
ATCTTTCGGTCTGCTAGGTATGAAAGAAAGAGTCGATTTGCTCGAAGGCTCAATGACAATCGATTCGAAAATAGGTCTTG
GGACATTTATATTGATTAAAGTTCCACTGTCTTTGTAA

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (292-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	89.351	100	0.894