Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   RZ534_RS07185 Genome accession   NZ_CP136643
Coordinates   1399745..1400326 (+) Length   193 a.a.
NCBI ID   WP_017367156.1    Uniprot ID   A0AB39J8T9
Organism   Bacillus altitudinis strain RS1     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1394745..1405326
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RZ534_RS07160 (RZ534_07160) - 1395409..1396587 (+) 1179 WP_048001606.1 N-acetyldiaminopimelate deacetylase -
  RZ534_RS07165 (RZ534_07165) - 1396638..1396880 (+) 243 WP_317329448.1 YkuS family protein -
  RZ534_RS07170 (RZ534_07170) - 1396905..1397714 (-) 810 WP_035392203.1 mechanosensitive ion channel family protein -
  RZ534_RS07175 (RZ534_07175) ahpA 1397986..1398528 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  RZ534_RS07180 (RZ534_07180) - 1398805..1399263 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  RZ534_RS07185 (RZ534_07185) rok 1399745..1400326 (+) 582 WP_017367156.1 hypothetical protein Regulator
  RZ534_RS07190 (RZ534_07190) - 1400389..1401306 (-) 918 WP_317329095.1 sigmaE regulated sporulation protein -
  RZ534_RS07195 (RZ534_07195) - 1401390..1401971 (+) 582 WP_175387071.1 molybdenum cofactor guanylyltransferase -
  RZ534_RS07200 (RZ534_07200) - 1402001..1403017 (+) 1017 WP_317329096.1 ThiF family adenylyltransferase -
  RZ534_RS07205 (RZ534_07205) glp 1403027..1404301 (+) 1275 WP_317329097.1 gephyrin-like molybdotransferase Glp -
  RZ534_RS07210 (RZ534_07210) mobB 1404283..1404810 (+) 528 WP_304717228.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  RZ534_RS07215 (RZ534_07215) - 1404803..1405294 (+) 492 WP_017367162.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21875.86 Da        Isoelectric Point: 9.7309

>NTDB_id=892129 RZ534_RS07185 WP_017367156.1 1399745..1400326(+) (rok) [Bacillus altitudinis strain RS1]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=892129 RZ534_RS07185 WP_017367156.1 1399745..1400326(+) (rok) [Bacillus altitudinis strain RS1]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAAACGGATTCATTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACCAGCAG
CCTGCGCAAACGCAGTCAAACGTTACATCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTCCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

80

98.446

0.788