Detailed information NTG0892045

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: RAS18_RS12890
• Genome accession: NZ_CP136635
• Coordinates: 2582252..2584585 (-)
• Length: 777 a.a.
• NCBI ID: WP_406620657.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus subsp. globigii strain Hab-5
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2577252..2589585

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RAS18_RS12855	-	2577583..2577921 (-)	339	WP_004429433.1	YqxA family protein	-
RAS18_RS12860	spoIIP	2577940..2579148 (-)	1209	WP_010789251.1	stage II sporulation protein P	-
RAS18_RS12865	gpr	2579215..2580318 (-)	1104	WP_406620656.1	GPR endopeptidase	-
RAS18_RS12870	rpsT	2580523..2580789 (+)	267	WP_003325396.1	30S ribosomal protein S20	-
RAS18_RS12875	holA	2580804..2581847 (-)	1044	WP_010789253.1	DNA polymerase III subunit delta	-
RAS18_RS12880	-	2581887..2582036 (-)	150	WP_010789254.1	hypothetical protein	-
RAS18_RS12885	-	2582077..2582211 (+)	135	WP_003229983.1	YqzM family protein	-
RAS18_RS12890	comEC	2582252..2584585 (-)	2334	WP_406620657.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
RAS18_RS12895	-	2584592..2585161 (-)	570	WP_003325392.1	ComE operon protein 2	-
RAS18_RS12900	comEA	2585229..2585852 (-)	624	WP_406620658.1	helix-hairpin-helix domain-containing protein	Machinery gene
RAS18_RS12905	comER	2585936..2586757 (+)	822	WP_406620659.1	late competence protein ComER	-
RAS18_RS12910	-	2586827..2587567 (-)	741	WP_406620660.1	class I SAM-dependent methyltransferase	-
RAS18_RS12915	rsfS	2587564..2587920 (-)	357	WP_003325387.1	ribosome silencing factor	-
RAS18_RS12920	yqeK	2587937..2588497 (-)	561	WP_061572766.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
RAS18_RS12925	-	2588487..2589056 (-)	570	WP_003325385.1	nicotinate-nucleotide adenylyltransferase	-
RAS18_RS12930	yhbY	2589068..2589358 (-)	291	WP_003325384.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 777 a.a.
• Molecular weight: 87132.09 Da
• Isoelectric Point: 8.8376

>NTDB_id=892045 RAS18_RS12890 WP_406620657.1 2582252..2584585(-) (comEC) [Bacillus atrophaeus subsp. globigii strain Hab-5]
MKNTRLLLPLAAASATAGIAAASFFSALLIFVLSLFFVYIKTKQLSLVFVSLSAFTIYFFLTSVIDSQNVSSYDIGTYKL
RAVIQEIPKIDGDRMSMVVRTPDGEKWVSSYKMESVAEKEKLSQIEPGTACTFTGSLEKPKNATVPGTFDYNQYLYSQHI
HWNYSITAIQNCSTADGIQYRLLSVRKSLISFMNDHVPETSAGIVQALILGDRFYLMDDVLEAYQKLGVVHLLAISGLHV
GIVTAGIFYVLIRIGITREKAAILLLLFLPVYTILTGAAPSVMRAALMSGLYFIGSLWGKRMNPSIVICLSYLILLLFNP
YHLFQIGFQLSFAVSFSLILSSSIFKKLQSGGLVQLAMVSLIAQLGSLPILIYYFQQFSLISIPMNIIMVPFYTMFVMPF
SMIGFLLLSLSEPVGEYLFYWFDYIMRWSDKLIKYAADIEQFTVIAARPNVLVLFGLIGSIVVLLTAMEKSALYQRLLSV
LLFIAMLFLVVIFPRLDPEGEVDMLDIGQGDSMFISAPYQRGHVMIDTGGILSYLTEPWREKRHPFSLSEKVLIPFLTAK
GIKQLDALILTHADQDHIGEAKVLIKRHKVKQLIVPKGFVSEPNDEKVLRTAQQEGIRITEVKRGDTFQIKDLQFRVLSP
ETPDLNSKNNSSLVLWMKTGHLSWVLTGDLEKEGEQEIMKAFPDLKADILKAGHHGSKGSTGEEFVRHLKPKAAIISAGE
NNRYHHPHQEVLDILKAHSVRIFRTDQSGTIQYRFKSGFGTFSVYPPYDTTGMMETN

Nucleotide

• Length: 2334 bp

>NTDB_id=892045 RAS18_RS12890 WP_406620657.1 2582252..2584585(-) (comEC) [Bacillus atrophaeus subsp. globigii strain Hab-5]
ATGAAGAACACACGCCTTCTTTTGCCTCTGGCGGCAGCATCAGCAACGGCTGGCATAGCTGCTGCCTCCTTTTTCTCCGC
ACTTCTCATATTCGTTTTATCACTCTTCTTTGTTTATATCAAAACAAAACAGCTCTCACTCGTTTTTGTTAGTTTATCGG
CTTTTACGATCTATTTTTTCTTAACCTCTGTTATCGATTCTCAGAATGTATCGTCCTATGACATCGGCACTTATAAGCTT
CGGGCGGTGATTCAGGAAATTCCAAAGATTGACGGAGACCGTATGTCCATGGTAGTTCGAACGCCTGATGGGGAAAAGTG
GGTTTCATCATATAAAATGGAGTCGGTTGCTGAAAAGGAAAAACTTTCACAGATAGAGCCAGGGACGGCTTGTACGTTTA
CCGGTTCTTTAGAAAAGCCGAAAAATGCAACGGTTCCCGGCACTTTCGATTATAATCAGTATCTGTACAGCCAGCATATT
CACTGGAATTACTCGATAACGGCAATCCAAAATTGCAGCACGGCAGATGGAATACAGTATAGGCTTTTAAGTGTGAGAAA
GTCTCTTATTTCATTTATGAATGACCATGTTCCGGAAACCTCAGCAGGCATCGTGCAGGCGCTCATCTTGGGTGACAGAT
TTTATCTTATGGACGATGTGCTGGAAGCGTATCAAAAGCTCGGGGTTGTCCATCTGCTTGCAATTTCAGGGCTTCATGTA
GGTATTGTGACGGCTGGTATATTCTATGTGCTCATTCGTATCGGGATAACGAGAGAGAAGGCTGCCATTCTGCTGCTGTT
GTTTTTGCCTGTTTATACGATTTTAACCGGAGCGGCTCCGTCTGTGATGCGCGCAGCTCTTATGTCAGGGCTTTATTTTA
TCGGCAGTTTGTGGGGAAAGCGTATGAATCCTTCAATAGTGATCTGTCTTTCTTATTTAATTCTCCTTTTGTTTAATCCG
TATCATCTTTTTCAAATAGGGTTTCAGCTCTCTTTTGCCGTAAGTTTCTCTTTAATACTTTCTTCCTCTATTTTTAAAAA
ACTTCAAAGCGGGGGACTCGTGCAGCTCGCCATGGTGTCACTCATCGCTCAGCTTGGATCGCTTCCCATCCTTATCTATT
ATTTTCAGCAGTTTTCTCTTATCAGTATACCGATGAATATCATTATGGTGCCTTTTTATACGATGTTTGTCATGCCGTTT
TCTATGATAGGTTTTCTTTTGTTAAGTTTGTCTGAGCCGGTCGGTGAGTACCTGTTTTATTGGTTTGATTACATCATGCG
CTGGAGTGACAAGCTGATAAAGTATGCTGCAGATATTGAGCAATTCACAGTGATTGCAGCTCGTCCAAATGTGCTTGTCT
TGTTTGGGCTGATTGGATCTATCGTTGTTTTGTTGACAGCCATGGAGAAATCCGCCCTTTACCAAAGACTTCTGTCTGTG
CTGCTCTTTATCGCAATGCTTTTTCTGGTGGTTATTTTTCCTCGCCTGGACCCCGAGGGAGAAGTGGATATGCTTGATAT
CGGTCAGGGAGACAGCATGTTTATCAGCGCTCCGTATCAGCGCGGCCATGTGATGATAGACACTGGAGGAATCCTTTCAT
ACTTAACAGAGCCATGGAGGGAAAAACGGCATCCTTTTTCGCTTAGCGAAAAGGTGCTCATTCCTTTCTTAACAGCAAAA
GGCATTAAACAGCTTGATGCCTTAATTTTGACTCATGCGGACCAAGACCATATAGGGGAAGCAAAGGTTCTGATCAAGCG
GCATAAAGTCAAACAGCTCATTGTGCCGAAAGGATTTGTTTCTGAACCGAATGATGAAAAAGTGCTGCGGACCGCACAGC
AAGAGGGAATTCGCATTACAGAGGTTAAACGAGGCGACACCTTTCAGATAAAGGATTTACAGTTTCGTGTACTGTCGCCT
GAGACTCCCGACCTGAACAGCAAAAATAACTCTTCTCTCGTGCTATGGATGAAAACAGGTCATCTCAGCTGGGTGCTGAC
AGGCGATCTCGAAAAGGAAGGGGAACAGGAGATCATGAAAGCTTTTCCGGATCTAAAAGCGGATATTTTAAAGGCGGGGC
ATCATGGCAGTAAAGGATCTACCGGAGAAGAGTTTGTCCGCCACCTGAAACCAAAGGCGGCAATTATTTCTGCCGGTGAG
AATAATCGGTATCACCATCCCCACCAGGAAGTCCTTGATATATTGAAAGCTCATTCTGTCCGCATTTTCCGCACTGATCA
AAGCGGGACGATCCAATATAGATTTAAAAGCGGGTTTGGAACCTTTTCTGTCTATCCTCCATATGATACAACAGGTATGA
TGGAGACGAACTAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (508-719)

• Domain of unknown function (DUF4131) (DUF4131) (24-169)

• Competence protein (Competence) (208-467)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	65.637	100	0.656