Detailed information
Bioinformatically predicted
Overview
| Name | hapR | Type | Regulator |
| Locus tag | OCU30_RS10075 | Genome accession | NZ_AP024887 |
| Coordinates | 2161657..2162274 (+) | Length | 205 a.a. |
| NCBI ID | WP_077315740.1 | Uniprot ID | A0A1R4B8V8 |
| Organism | Vibrio palustris strain CECT 9027 | ||
| Function | regulate expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2156657..2167274
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OCU30_RS10050 | panC | 2157176..2158066 (+) | 891 | WP_077315735.1 | pantoate--beta-alanine ligase | - |
| OCU30_RS10055 | - | 2158121..2158891 (-) | 771 | WP_077315736.1 | ABC transporter permease | - |
| OCU30_RS10060 | - | 2158900..2159814 (-) | 915 | WP_077315737.1 | ABC transporter ATP-binding protein | - |
| OCU30_RS10065 | can | 2160050..2160718 (+) | 669 | WP_077315738.1 | carbonate dehydratase | - |
| OCU30_RS10070 | hpt | 2160801..2161331 (-) | 531 | WP_077315739.1 | hypoxanthine phosphoribosyltransferase | - |
| OCU30_RS10075 | hapR | 2161657..2162274 (+) | 618 | WP_077315740.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| OCU30_RS10080 | lpdA | 2162380..2163804 (-) | 1425 | WP_077315741.1 | dihydrolipoyl dehydrogenase | - |
| OCU30_RS10085 | aceF | 2164046..2165935 (-) | 1890 | WP_077315742.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
Sequence
Protein
Download Length: 205 a.a. Molecular weight: 23697.93 Da Isoelectric Point: 5.8279
>NTDB_id=89148 OCU30_RS10075 WP_077315740.1 2161657..2162274(+) (hapR) [Vibrio palustris strain CECT 9027]
MDASIERRPRTRLSPQKRKHQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTFVVRQFSNFL
TDNIDLDLHARQNLKNIADGIVDLAIDDCHWLKVWFEWSASTREEVWPLFVSSNHTNQLLLKNMFTKAIERGELDNRYAA
EDMATLFHGLCYSLFVQTNRVPNEHSVHQLVDNYLDMLCIYAKES
MDASIERRPRTRLSPQKRKHQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTFVVRQFSNFL
TDNIDLDLHARQNLKNIADGIVDLAIDDCHWLKVWFEWSASTREEVWPLFVSSNHTNQLLLKNMFTKAIERGELDNRYAA
EDMATLFHGLCYSLFVQTNRVPNEHSVHQLVDNYLDMLCIYAKES
Nucleotide
Download Length: 618 bp
>NTDB_id=89148 OCU30_RS10075 WP_077315740.1 2161657..2162274(+) (hapR) [Vibrio palustris strain CECT 9027]
ATGGATGCTTCTATCGAAAGGCGGCCGCGTACCCGCTTATCCCCTCAAAAGCGTAAACATCAGTTAATGGAAATTGCGCT
CGAAGTTTTTGCAAAACGGGGAATTGGACGTGGCGGTCATGCTGATATCGCCGAAATTGCACAAGTATCAGTCGCGACTG
TCTTTAACTATTTCCCAACCAGAGAAGACTTAGTCGACGATGTACTGACATTTGTGGTCCGTCAATTCTCTAACTTTTTA
ACTGATAATATCGATCTTGATTTGCATGCACGTCAAAATCTAAAAAACATTGCTGACGGTATTGTGGACCTTGCAATTGA
CGATTGTCACTGGCTGAAAGTCTGGTTTGAATGGAGTGCCTCTACCCGTGAAGAAGTATGGCCTCTCTTTGTATCCTCGA
ACCATACAAATCAACTGCTGCTGAAAAATATGTTCACTAAAGCCATTGAGCGTGGTGAGCTAGATAATCGCTACGCGGCA
GAGGACATGGCGACGCTATTCCATGGCCTTTGCTATTCTCTGTTTGTACAAACGAACCGCGTCCCCAACGAACATAGTGT
TCACCAGCTAGTGGACAACTACTTAGATATGTTATGTATCTACGCAAAAGAAAGCTAA
ATGGATGCTTCTATCGAAAGGCGGCCGCGTACCCGCTTATCCCCTCAAAAGCGTAAACATCAGTTAATGGAAATTGCGCT
CGAAGTTTTTGCAAAACGGGGAATTGGACGTGGCGGTCATGCTGATATCGCCGAAATTGCACAAGTATCAGTCGCGACTG
TCTTTAACTATTTCCCAACCAGAGAAGACTTAGTCGACGATGTACTGACATTTGTGGTCCGTCAATTCTCTAACTTTTTA
ACTGATAATATCGATCTTGATTTGCATGCACGTCAAAATCTAAAAAACATTGCTGACGGTATTGTGGACCTTGCAATTGA
CGATTGTCACTGGCTGAAAGTCTGGTTTGAATGGAGTGCCTCTACCCGTGAAGAAGTATGGCCTCTCTTTGTATCCTCGA
ACCATACAAATCAACTGCTGCTGAAAAATATGTTCACTAAAGCCATTGAGCGTGGTGAGCTAGATAATCGCTACGCGGCA
GAGGACATGGCGACGCTATTCCATGGCCTTTGCTATTCTCTGTTTGTACAAACGAACCGCGTCCCCAACGAACATAGTGT
TCACCAGCTAGTGGACAACTACTTAGATATGTTATGTATCTACGCAAAAGAAAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hapR | Vibrio cholerae C6706 |
74.627 |
98.049 |
0.732 |
| hapR | Vibrio cholerae strain A1552 |
74.627 |
98.049 |
0.732 |
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
74.129 |
98.049 |
0.727 |