Detailed information NTG0891456

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: AAGT87_RS14050
• Genome accession: NZ_CP152071
• Coordinates: 2037497..2038897 (-)
• Length: 466 a.a.
• NCBI ID: WP_341264769.1
• Uniprot ID: -
• Organism: Vibrio cholerae strain Sudan_2019_18
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 2032497..2043897

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAGT87_RS14040 (AAGT87_14045)	add	2033811..2034815 (-)	1005	WP_000633281.1	adenosine deaminase	-
AAGT87_RS14045 (AAGT87_14050)	-	2034907..2037438 (-)	2532	WP_001128660.1	EAL domain-containing protein	-
AAGT87_RS14050 (AAGT87_14055)	luxO	2037497..2038897 (-)	1401	WP_341264769.1	nitrogen regulation protein NR(I)	Regulator
AAGT87_RS14055 (AAGT87_14060)	glnL	2038907..2039965 (-)	1059	Protein_1739	nitrogen regulation protein NR(II)	-
AAGT87_RS14060 (AAGT87_14065)	-	2040104..2040694 (-)	591	WP_341260132.1	DUF4124 domain-containing protein	-
AAGT87_RS14065 (AAGT87_14070)	glnA	2040872..2042281 (-)	1410	WP_000110151.1	glutamate--ammonia ligase	-
AAGT87_RS14070 (AAGT87_14075)	-	2042426..2042749 (+)	324	WP_000244705.1	hypothetical protein	-

Sequence

Protein

• Length: 466 a.a.
• Molecular weight: 52335.84 Da
• Isoelectric Point: 6.6387

>NTDB_id=891456 AAGT87_RS14050 WP_341264769.1 2037497..2038897(-) (luxO) [Vibrio cholerae strain Sudan_2019_18]
MSRGYVWVVDDDSSIRWVMEKTLSSAHIKCETFADAESVLLALERETPDVLVSDIRMPGMDGIALLNQVHQRTPELPVII
MTAHSDLDAAVNAYQQGAFEYLPKPFDVDETLTLVERAIAHGQEQRKTSHRPSENYSAPEIIGEALAMQEVFRAIGRLSR
SSISVLINGESGTGKELVAHALHRHSPRAQKPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQANGGTLFLD
EIGDMPLDIQTRLLRVLADGQFYRVGGHVAIKVDVRIVAATHQNLEKLVHQGKFREDLFHRLNVIRIHIPSLRERRQDIE
KLTKHFLALAAKELGVEMKTLNPRTVDILTKLDWPGNVRQLENMCRWLTVMASGSEVLPSDLPSELLSERKASHFDNDIS
WQKQLETWAKSALASGETELLAYALPEFERILLEAALHHTNGHKQEAAKVLGWGRNTLTRKLKELY

Nucleotide

• Length: 1401 bp

>NTDB_id=891456 AAGT87_RS14050 WP_341264769.1 2037497..2038897(-) (luxO) [Vibrio cholerae strain Sudan_2019_18]
ATGAGTAGAGGATACGTCTGGGTTGTCGATGATGATAGTTCCATTCGCTGGGTAATGGAGAAAACGCTCTCTTCAGCCCA
TATAAAATGCGAAACCTTCGCAGATGCGGAAAGCGTACTGCTGGCACTGGAGCGTGAAACCCCCGACGTTCTTGTCTCAG
ATATTCGCATGCCAGGGATGGATGGCATTGCTCTGCTCAATCAAGTACACCAACGCACCCCTGAACTTCCGGTGATCATT
ATGACCGCGCATTCGGATCTGGATGCCGCCGTCAATGCCTACCAACAAGGTGCCTTTGAGTATCTTCCCAAGCCTTTTGA
TGTCGATGAAACCCTCACCTTAGTCGAACGTGCCATCGCTCATGGTCAAGAGCAGCGCAAGACATCTCATCGTCCCAGTG
AAAACTATTCCGCCCCTGAAATCATTGGCGAAGCGCTTGCTATGCAAGAAGTGTTTCGCGCAATTGGTCGCTTATCACGC
TCTTCGATTTCGGTATTGATCAACGGTGAATCGGGAACCGGTAAAGAATTGGTCGCTCATGCTCTGCATAGACATAGTCC
TCGTGCCCAAAAGCCGTTTATTGCCCTCAATATGGCGGCGATTCCCAAAGATCTCATCGAATCTGAACTGTTTGGCCATG
AAAAAGGCGCGTTTACTGGTGCAAATACCGTGCGCCAAGGTCGCTTCGAACAAGCCAATGGCGGCACTTTATTTCTTGAT
GAAATTGGCGATATGCCGCTCGATATTCAAACTCGGTTATTGCGCGTGTTGGCGGATGGTCAGTTTTATCGCGTTGGCGG
TCATGTCGCGATAAAAGTCGATGTGCGAATCGTCGCAGCCACTCACCAAAATCTTGAAAAACTGGTTCATCAAGGCAAAT
TTCGTGAAGACTTATTCCATCGTCTGAACGTTATTCGCATCCATATCCCGTCACTGCGTGAACGTCGACAAGATATTGAA
AAGCTCACTAAGCACTTTTTAGCGCTGGCAGCCAAAGAGCTCGGAGTGGAGATGAAAACGCTCAACCCGCGCACCGTGGA
TATTCTGACCAAGCTCGATTGGCCGGGTAACGTGCGCCAACTCGAAAACATGTGTCGCTGGCTCACGGTGATGGCAAGTG
GAAGTGAAGTGCTGCCAAGTGATCTTCCTTCCGAATTATTATCAGAAAGGAAAGCCAGCCATTTTGATAATGATATAAGT
TGGCAGAAACAGTTAGAAACATGGGCAAAATCTGCACTGGCCTCCGGTGAAACCGAGTTGCTTGCCTACGCACTCCCAGA
ATTTGAACGTATACTTTTAGAAGCGGCACTTCACCACACCAATGGACATAAACAAGAAGCCGCCAAAGTATTGGGCTGGG
GACGGAATACGCTAACACGTAAACTCAAAGAGTTATATTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory protein, Fis family (HTH_8) (425-465)

• Response regulator receiver domain (Response_reg) (6-115)

• Sigma-54 interaction domain (Sigma54_activat) (141-308)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	37.662	99.142	0.373
pilR	Pseudomonas aeruginosa PAK	37.204	99.785	0.371