Detailed information NTG0089144

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: AABK11_RS21700
• Genome accession: NZ_AP027685
• Coordinates: 4426496..4427521 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain PSS-10
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4421496..4432521

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AABK11_RS21680 (VEE24_41570)	metJ	4422557..4422874 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
AABK11_RS21685 (VEE24_41580)	yiiX	4423058..4423666 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
AABK11_RS21690 (VEE24_41590)	rpmE	4423727..4423939 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
AABK11_RS21695 (VEE24_41600)	priA	4424142..4426340 (+)	2199	WP_001355569.1	primosomal protein N'	Machinery gene
AABK11_RS21700 (VEE24_41610)	cytR	4426496..4427521 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
AABK11_RS21705 (VEE24_41620)	ftsN	4427613..4428572 (+)	960	WP_000068828.1	cell division protein FtsN	-
AABK11_RS21710 (VEE24_41630)	hslV	4428665..4429195 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
AABK11_RS21715 (VEE24_41640)	hslU	4429205..4430536 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
AABK11_RS21720 (VEE24_41650)	menA	4430603..4431529 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
AABK11_RS21725 (VEE24_41660)	rraA	4431622..4432107 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
AABK11_RS21730 (VEE24_41670)	zapB	4432192..4432437 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=89144 AABK11_RS21700 WP_000644904.1 4426496..4427521(+) (cytR) [Escherichia coli strain PSS-10]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=89144 AABK11_RS21700 WP_000644904.1 4426496..4427521(+) (cytR) [Escherichia coli strain PSS-10]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628