Detailed information NTG0891384

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: AAFX34_RS18705
• Genome accession: NZ_CP151937
• Coordinates: 2434191..2435471 (-)
• Length: 426 a.a.
• NCBI ID: WP_011078148.1
• Uniprot ID: Q7MMG6
• Organism: Vibrio vulnificus strain TBV029
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2429191..2440471

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAFX34_RS18690 (AAFX34_19245)	ppiD	2429219..2431078 (-)	1860	WP_013572180.1	peptidylprolyl isomerase	-
AAFX34_RS18695 (AAFX34_19250)	-	2431255..2431527 (-)	273	WP_013572181.1	HU family DNA-binding protein	-
AAFX34_RS18700 (AAFX34_19255)	lon	2431721..2434072 (-)	2352	WP_011078147.1	endopeptidase La	-
AAFX34_RS18705 (AAFX34_19260)	clpX	2434191..2435471 (-)	1281	WP_011078148.1	ATP-dependent protease ATP-binding subunit ClpX	Regulator
AAFX34_RS18710 (AAFX34_19265)	clpP	2435542..2436168 (-)	627	WP_011078149.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	Regulator
AAFX34_RS18715 (AAFX34_19270)	tig	2436274..2437572 (-)	1299	WP_011078150.1	trigger factor	-
AAFX34_RS18720 (AAFX34_19275)	-	2438124..2439911 (+)	1788	WP_045595802.1	ATP-binding protein	-

Sequence

Protein

• Length: 426 a.a.
• Molecular weight: 46542.04 Da
• Isoelectric Point: 4.5889

>NTDB_id=891384 AAFX34_RS18705 WP_011078148.1 2434191..2435471(-) (clpX) [Vibrio vulnificus strain TBV029]
MTDKSKESGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKDVLPKRESEALPTPREIRAHLDDYVI
GQDHAKKVLAVAVYNHYKRLRNGDTTSDGVELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDV
ENIIQKLLQKCDYDVAKAERGIVYIDEIDKISRKAENPSITRDVSGEGVQQALLKLVEGTIASVPPQGGRKHPQQEFLQV
DTSKILFICGGAFAGLDKVIEQRVATGTGIGFGAEVRSKDESKTVGELFTQVEPEDLVKYGLIPEFIGRLPVTASLTELD
EEALIQILCQPKNALTKQYAALFELEGADLEFREDALKAIAKKAMERKTGARGLRSILEGVLLETMYELPSMDDVSKVVI
DESVINGESEPLLIYTNSDSQAAGAE

Nucleotide

• Length: 1281 bp

>NTDB_id=891384 AAFX34_RS18705 WP_011078148.1 2434191..2435471(-) (clpX) [Vibrio vulnificus strain TBV029]
ATGACAGACAAAAGCAAAGAGAGTGGTAGTGGTAAGTTGCTTTACTGCTCTTTCTGCGGCAAAAGCCAGCACGAAGTTCG
CAAGCTAATCGCTGGTCCATCCGTTTACATCTGTGACGAATGTGTCGATTTATGTAACGACATCATCCGTGAAGAGATCA
AAGATGTGCTGCCAAAACGCGAATCTGAAGCGTTGCCAACGCCTCGTGAGATCCGTGCACACCTTGATGACTATGTAATC
GGTCAAGACCATGCGAAAAAAGTGCTCGCGGTTGCGGTATATAACCACTACAAGCGTTTACGTAATGGTGACACAACGAG
TGATGGCGTGGAGCTAGGTAAGAGTAACATCTTGCTGATCGGCCCAACAGGTAGCGGTAAGACGTTGCTTGCTGAGACGC
TTGCGCGTTTCCTCGATGTACCGTTCACTATGGCAGATGCCACGACGCTAACAGAAGCGGGTTATGTGGGCGAAGATGTT
GAAAACATCATTCAAAAGTTGCTTCAGAAATGTGATTACGACGTAGCGAAAGCAGAGCGTGGTATTGTGTATATCGATGA
AATTGACAAGATTTCTCGTAAAGCAGAAAACCCATCTATTACTCGTGACGTTTCTGGTGAAGGCGTTCAGCAAGCGCTGC
TTAAACTGGTTGAAGGTACGATTGCTTCTGTACCACCTCAAGGTGGTCGTAAGCATCCTCAGCAAGAGTTTTTGCAAGTG
GATACGTCAAAGATCCTCTTTATCTGTGGTGGTGCATTTGCCGGTCTAGATAAAGTGATCGAACAACGCGTTGCAACAGG
TACAGGCATTGGTTTTGGTGCGGAAGTCCGCTCTAAAGACGAAAGCAAAACAGTGGGCGAATTGTTCACTCAGGTAGAGC
CAGAAGATCTTGTGAAATATGGTTTGATTCCTGAGTTTATTGGTCGTCTACCAGTGACCGCTTCGTTGACCGAGTTAGAC
GAAGAAGCATTAATTCAGATTCTTTGCCAACCAAAAAATGCGCTAACAAAGCAATATGCAGCGCTGTTTGAACTGGAAGG
TGCGGATCTTGAGTTCAGAGAAGATGCGCTAAAAGCGATCGCGAAAAAAGCGATGGAGCGTAAAACAGGCGCTCGTGGCT
TGCGTTCAATTTTGGAAGGCGTGTTGCTAGAAACCATGTATGAACTGCCATCGATGGACGACGTGAGCAAAGTTGTCATT
GATGAATCGGTGATTAATGGTGAATCAGAGCCGCTTTTGATTTACACCAACAGTGATAGCCAAGCCGCTGGCGCTGAGTA
A

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (114-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (14-51)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (319-396)

3D structure

• AlphaFold DB: Q7MMG6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	59.102	94.131	0.556
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.062	95.07	0.523