Detailed information NTG0891338

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: AAFX34_RS10025
• Genome accession: NZ_CP151937
• Coordinates: 534954..537776 (-)
• Length: 940 a.a.
• NCBI ID: WP_061058940.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain TBV029
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 529954..542776

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAFX34_RS10010 (AAFX34_10000)	lysC	530074..531423 (-)	1350	WP_061058943.1	lysine-sensitive aspartokinase 3	-
AAFX34_RS10015 (AAFX34_10005)	-	531938..533059 (+)	1122	WP_061058942.1	pyridoxal-phosphate-dependent aminotransferase family protein	-
AAFX34_RS10020 (AAFX34_10010)	-	533124..534887 (-)	1764	WP_061058941.1	PglL family O-oligosaccharyltransferase	-
AAFX34_RS10025 (AAFX34_10015)	uvrA	534954..537776 (-)	2823	WP_061058940.1	excinuclease ABC subunit UvrA	Machinery gene
AAFX34_RS10030 (AAFX34_10020)	galU	537918..538790 (-)	873	WP_011079387.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
AAFX34_RS10035 (AAFX34_10025)	qstR	538976..539623 (-)	648	WP_011079388.1	response regulator transcription factor	Regulator
AAFX34_RS10040 (AAFX34_10030)	ssb	539923..540462 (+)	540	WP_011079389.1	single-stranded DNA-binding protein	Machinery gene
AAFX34_RS10045 (AAFX34_10035)	csrD	540615..542612 (+)	1998	WP_043877331.1	RNase E specificity factor CsrD	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 103911.35 Da
• Isoelectric Point: 6.4802

>NTDB_id=891338 AAFX34_RS10025 WP_061058940.1 534954..537776(-) (uvrA) [Vibrio vulnificus strain TBV029]
MDKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPDHKVPLAAQTISQMVDKVLELPEGAKMMLLAPIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLTDPPTLELHKKHTIEVVVDRFKVRGDLQQRLAESFETTLELSGGIAVIAPMEGD
GDEIVFSANFACPHCGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPERVIQDANLSLAQGAIRGWDQKNYYYFQML
TSLAEHYDFDLHAPFNSLSKRIQEVILKGSGGTEIEFKYINDRGDIRLKRHPFEGILNTLERRYRDTESNSVREELVKYI
STKPCTSCGGTRLRLEARNVFINDTTLPQIVELSIADALTFFATLKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAIRCADHVIDIG
PGAGVHGGQVVAEGTMAEILANPDSLTGQYLSGAKQIIVPTQRTPRDKNKTVELIGASGNNLKEVNLSVPVGLFSCITGV
SGSGKSTLINDTFFKIAHTQLNGATTAQPAPYKSIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFSGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVHYKGKSIDEVLEMTVEDAHEFFA
PVPVIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGEIIAQGTPEDVAQIEGSHTARFLKPMLK

Nucleotide

• Length: 2823 bp

>NTDB_id=891338 AAFX34_RS10025 WP_061058940.1 534954..537776(-) (uvrA) [Vibrio vulnificus strain TBV029]
ATGGACAAGATAGAAGTTCGCGGAGCACGTACCCATAATCTCAAAAACATAAATCTCACCATTCCCCGAGATAAACTGAT
CGTTATTACGGGCTTATCCGGCTCAGGTAAGTCTTCTTTGGCATTTGACACTTTGTACGCAGAGGGTCAGCGACGTTATG
TGGAATCCCTCTCTGCTTATGCTCGTCAATTTCTTTCATTGATGGAAAAGCCCGATGTTGACCACATTGAAGGCCTCTCG
CCAGCCATTTCTATCGAGCAAAAATCCACCTCACACAACCCGCGTTCAACCGTAGGGACCATCACCGAAGTGTATGACTA
CCTTCGCCTACTGTATGCTCGCGTTGGTGAACCTCGCTGTCCTGACCACAAAGTCCCTTTAGCGGCTCAAACCATTAGCC
AAATGGTCGACAAAGTGCTGGAGCTGCCTGAAGGTGCCAAAATGATGTTGCTCGCCCCCATCGTGAAAGAGCGCAAAGGC
GAGCACGTTAAAACATTAGAGAATCTTGCTGCTCAAGGTTTTATCCGTGCGCGTATTGACGGAGAGACCTGTGACCTCAC
CGATCCACCAACGCTAGAGTTACACAAAAAGCACACCATTGAAGTGGTGGTTGACCGCTTTAAAGTGCGTGGCGATTTAC
AACAAAGGCTCGCAGAATCCTTTGAAACGACACTGGAACTCTCAGGTGGCATCGCTGTGATTGCCCCTATGGAGGGTGAC
GGTGATGAGATCGTTTTTTCCGCCAATTTTGCGTGTCCCCACTGTGGTTATAGTATGCAAGAGCTTGAGCCACGTTTGTT
CTCGTTCAATAACCCAGCAGGGGCTTGTGGCACCTGTGATGGCCTCGGGGTACAGCAATATTTTGACCCAGAACGTGTGA
TTCAAGATGCCAATTTAAGTCTTGCACAAGGGGCGATTCGTGGTTGGGATCAGAAGAACTATTACTATTTCCAAATGCTC
ACCTCGCTGGCTGAGCATTACGATTTCGATTTACATGCCCCTTTTAATTCGCTTTCAAAACGCATCCAAGAGGTCATCTT
AAAAGGCTCAGGGGGCACTGAAATCGAATTTAAGTACATCAACGATCGAGGCGACATTCGTCTAAAACGTCATCCATTTG
AAGGCATTCTCAATACACTCGAACGCCGTTATCGCGACACCGAATCTAACTCGGTACGAGAAGAGTTGGTGAAATATATC
TCCACCAAACCTTGCACCAGTTGTGGTGGAACGCGTCTGCGCCTAGAAGCACGCAACGTGTTTATTAATGACACGACATT
GCCACAAATCGTCGAGTTGAGTATCGCGGATGCATTGACCTTTTTCGCCACCTTAAAACTCGAAGGGCAGCGAGCTCAAA
TTGCGGAGAAGGTCATGAAAGAGATCAACGATCGACTGCAGTTTTTAGTCAACGTTGGCCTCAATTATTTGAACCTGTCT
CGCAGCGCTGAAACCTTGTCTGGTGGCGAAGCACAGCGTATTCGTCTGGCTAGCCAGATCGGCGCTGGTTTGGTTGGCGT
GATGTACGTGCTCGATGAACCGTCAATCGGCCTTCACCAGCGTGACAACGAGCGCTTACTCAAAACACTCACGCACTTAC
GCGATCTCGGCAATACCGTATTAGTCGTAGAGCATGATGAAGATGCGATTCGTTGTGCCGACCATGTGATTGACATTGGC
CCTGGTGCAGGCGTACATGGTGGCCAAGTGGTTGCCGAAGGAACAATGGCCGAGATTCTCGCCAATCCAGACTCCTTGAC
CGGACAATACTTGAGCGGAGCCAAGCAGATTATTGTGCCGACTCAACGCACACCAAGAGATAAGAACAAAACGGTTGAGC
TCATTGGAGCTAGTGGCAACAACCTTAAAGAGGTCAATCTTTCGGTGCCTGTCGGGCTATTCAGTTGTATCACCGGGGTT
TCTGGTTCGGGTAAATCAACACTGATTAACGACACCTTCTTCAAAATTGCTCATACCCAACTCAATGGGGCGACCACTGC
TCAACCAGCGCCTTATAAGTCTATTAAAGGCTTAGAGCATTTTGATAAGGTCATCGATATCGACCAGAGCCCCATCGGCC
GCACACCGCGTTCGAATCCAGCAACCTATACGGGGATTTTCACTCCGATTCGAGAGCTGTTCTCTGGCACCCAAGAGTCT
CGTTCACGTGGCTATAAGCCAGGGCGTTTCAGCTTTAACGTTCGTGGTGGCCGCTGTGAAGCTTGCCAAGGTGATGGTGT
TATCAAGGTTGAAATGCACTTTTTACCTGATGTTTACGTCCCTTGTGATGTGTGTAAAGGCAAGCGCTACAACCGTGAAA
CGTTAGAAGTACACTACAAAGGGAAGAGCATCGATGAAGTGCTGGAAATGACGGTTGAAGACGCTCATGAGTTTTTCGCT
CCTGTCCCTGTCATCGCGCGTAAACTGCAAACCTTAATGGATGTTGGTCTTTCTTATATCCGTTTAGGTCAAGCGGCCAC
CACCCTCTCTGGCGGTGAAGCACAACGGGTGAAACTGGCCCGTGAGTTGTCCAAACGCGATACGGGTAAAACCCTTTATA
TTTTGGATGAACCAACAACGGGCCTACACTTCCACGATATCCAGCAACTTTTGACCGTATTGCATCGCTTACGTGATCAT
GGCAACACCGTTGTCGTGATTGAGCATAATTTAGATGTGATCAAAACGGCCGACTGGATCATCGACTTAGGTCCAGAAGG
CGGCCAAGGTGGAGGGGAAATCATTGCCCAAGGAACACCTGAAGATGTGGCGCAGATCGAAGGTTCGCATACCGCACGCT
TCCTTAAGCCTATGTTGAAATAG

Domains

Predicted by InterProScan.

• UvrA interaction domain (UvrA_inter) (130-236)

• ABC transporter (ABC_tran) (622-859)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-396)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	58.068	100	0.582
uvrA	Streptococcus pneumoniae TIGR4	58.068	100	0.582
uvrA	Streptococcus pneumoniae D39	58.068	100	0.582