Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RTE98_RS03325 Genome accession   NZ_CP136501
Coordinates   737000..737407 (-) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas frequens strain L27     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 732000..742407
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RTE98_RS03305 (RTE98_03305) - 732960..733826 (-) 867 WP_156244993.1 protein-glutamate O-methyltransferase CheR -
  RTE98_RS03310 (RTE98_03310) - 733888..735936 (-) 2049 WP_063540694.1 methyl-accepting chemotaxis protein -
  RTE98_RS03315 (RTE98_03315) - 736013..736549 (-) 537 WP_017245424.1 chemotaxis protein CheW -
  RTE98_RS03320 (RTE98_03320) pilH 736591..736956 (-) 366 WP_003297216.1 twitching motility response regulator PilH -
  RTE98_RS03325 (RTE98_03325) pilG 737000..737407 (-) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  RTE98_RS03330 (RTE98_03330) gshB 737643..738593 (+) 951 WP_017245425.1 glutathione synthase -
  RTE98_RS03335 (RTE98_03335) - 738681..739574 (+) 894 WP_017245426.1 energy transducer TonB -
  RTE98_RS03340 (RTE98_03340) - 739719..740288 (+) 570 WP_316958604.1 YqgE/AlgH family protein -
  RTE98_RS03345 (RTE98_03345) ruvX 740285..740713 (+) 429 WP_017245428.1 Holliday junction resolvase RuvX -
  RTE98_RS03350 (RTE98_03350) pyrR 740735..741250 (+) 516 WP_316958605.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  RTE98_RS03355 (RTE98_03355) - 741309..742325 (+) 1017 WP_017245430.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=891189 RTE98_RS03325 WP_003282729.1 737000..737407(-) (pilG) [Stutzerimonas frequens strain L27]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=891189 RTE98_RS03325 WP_003282729.1 737000..737407(-) (pilG) [Stutzerimonas frequens strain L27]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAGACGATTCGTCGCACCGCTGAAACCCTGCT
GAAGAAGGTAGGTTGCGATGTCATCACCGCTGTTGACGGTTTCGATGCGCTCGCCAAGATTGCAGATACTCATCCTCGTA
TCATCTTCGTCGATATTATGATGCCCAGGCTGGATGGCTATCAGACCTGTGCACTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCGGTGATCATGCTGTCTTCCAAAGATGGCCTCTTCGACAAGGCGAAAGGGCGTATCGTCGGATCCGATCAATA
CCTCACCAAGCCGTTCAGCAAAGAAGAGCTGCTAGGCGCAATCAAGGCGCACGTCCCTGATTTCGCGCCGGTGGAACAAG
CATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4