Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   RYX44_RS02090 Genome accession   NZ_CP136432
Coordinates   445539..445946 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain XM8     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 440539..450946
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RYX44_RS02060 - 440587..441591 (-) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -
  RYX44_RS02065 pyrR 441615..442127 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  RYX44_RS02070 ruvX 442239..442673 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  RYX44_RS02075 - 442673..443242 (-) 570 WP_003100947.1 YqgE/AlgH family protein -
  RYX44_RS02080 - 443291..444184 (-) 894 WP_003162015.1 energy transducer TonB -
  RYX44_RS02085 gshB 444331..445284 (-) 954 WP_003100943.1 glutathione synthase -
  RYX44_RS02090 pilG 445539..445946 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  RYX44_RS02095 pilH 445993..446358 (+) 366 WP_003084587.1 twitching motility response regulator PilH -
  RYX44_RS02100 - 446409..446945 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  RYX44_RS02105 pilJ 447030..449078 (+) 2049 WP_003100940.1 chemotaxis chemoreceptor PilJ -
  RYX44_RS02110 pilK 449139..450014 (+) 876 WP_003100938.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=891074 RYX44_RS02090 WP_003084583.1 445539..445946(+) (pilG) [Pseudomonas aeruginosa strain XM8]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=891074 RYX44_RS02090 WP_003084583.1 445539..445946(+) (pilG) [Pseudomonas aeruginosa strain XM8]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385