Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   RYX39_RS06295 Genome accession   NZ_CP136430
Coordinates   1234971..1235162 (+) Length   63 a.a.
NCBI ID   WP_127695478.1    Uniprot ID   -
Organism   Bacillus halotolerans strain Q2H2     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1229971..1240162
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RYX39_RS06265 (RYX39_06265) argF 1230817..1231774 (+) 958 Protein_1171 ornithine carbamoyltransferase -
  RYX39_RS06270 (RYX39_06270) - 1231860..1232039 (+) 180 WP_003239319.1 YjzC family protein -
  RYX39_RS06275 (RYX39_06275) - 1232085..1232270 (-) 186 WP_010333727.1 YjzD family protein -
  RYX39_RS06280 (RYX39_06280) - 1232529..1233266 (+) 738 WP_024120901.1 hypothetical protein -
  RYX39_RS06285 (RYX39_06285) - 1233349..1233912 (+) 564 WP_106022355.1 hypothetical protein -
  RYX39_RS06290 (RYX39_06290) med 1234003..1234956 (+) 954 WP_024120903.1 BMP family ABC transporter substrate-binding protein Regulator
  RYX39_RS06295 (RYX39_06295) comZ 1234971..1235162 (+) 192 WP_127695478.1 ComG operon transcriptional repressor ComZ Regulator
  RYX39_RS06300 (RYX39_06300) - 1235192..1235422 (-) 231 WP_081638273.1 hypothetical protein -
  RYX39_RS06305 (RYX39_06305) fabH 1235588..1236526 (+) 939 WP_010333732.1 beta-ketoacyl-ACP synthase III -
  RYX39_RS06310 (RYX39_06310) fabF 1236549..1237787 (+) 1239 WP_024120905.1 beta-ketoacyl-ACP synthase II -
  RYX39_RS06315 (RYX39_06315) - 1237867..1238652 (+) 786 WP_127695474.1 DUF2268 domain-containing protein -
  RYX39_RS06320 (RYX39_06320) appD 1238842..1239828 (+) 987 WP_127695472.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7244.30 Da        Isoelectric Point: 4.2564

>NTDB_id=891014 RYX39_RS06295 WP_127695478.1 1234971..1235162(+) (comZ) [Bacillus halotolerans strain Q2H2]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMTEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=891014 RYX39_RS06295 WP_127695478.1 1234971..1235162(+) (comZ) [Bacillus halotolerans strain Q2H2]
ATGCAGCACGAAAAATCACTTGAGTTTCTGCAAATAGCAATGAAATATCTGCCTGAAGCGAAAGAGCAGCTTGAAAAATC
AGGAATAGAGCTGTCGATGGAGGCCATTCAGCCGTTTATGAATTTATTTACAACGGTAATGACGGAAGCCTATGAGCTGG
GTAAATCCGACGCGAAATCTGAAACCGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

98.413

100

0.984