Detailed information NTG0891013

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: RYX39_RS06290
• Genome accession: NZ_CP136430
• Coordinates: 1234003..1234956 (+)
• Length: 317 a.a.
• NCBI ID: WP_024120903.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain Q2H2
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1229003..1239956

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RYX39_RS06265 (RYX39_06265)	argF	1230817..1231774 (+)	958	Protein_1171	ornithine carbamoyltransferase	-
RYX39_RS06270 (RYX39_06270)	-	1231860..1232039 (+)	180	WP_003239319.1	YjzC family protein	-
RYX39_RS06275 (RYX39_06275)	-	1232085..1232270 (-)	186	WP_010333727.1	YjzD family protein	-
RYX39_RS06280 (RYX39_06280)	-	1232529..1233266 (+)	738	WP_024120901.1	hypothetical protein	-
RYX39_RS06285 (RYX39_06285)	-	1233349..1233912 (+)	564	WP_106022355.1	hypothetical protein	-
RYX39_RS06290 (RYX39_06290)	med	1234003..1234956 (+)	954	WP_024120903.1	BMP family ABC transporter substrate-binding protein	Regulator
RYX39_RS06295 (RYX39_06295)	comZ	1234971..1235162 (+)	192	WP_127695478.1	ComG operon transcriptional repressor ComZ	Regulator
RYX39_RS06300 (RYX39_06300)	-	1235192..1235422 (-)	231	WP_081638273.1	hypothetical protein	-
RYX39_RS06305 (RYX39_06305)	fabH	1235588..1236526 (+)	939	WP_010333732.1	beta-ketoacyl-ACP synthase III	-
RYX39_RS06310 (RYX39_06310)	fabF	1236549..1237787 (+)	1239	WP_024120905.1	beta-ketoacyl-ACP synthase II	-
RYX39_RS06315 (RYX39_06315)	-	1237867..1238652 (+)	786	WP_127695474.1	DUF2268 domain-containing protein	-
RYX39_RS06320 (RYX39_06320)	appD	1238842..1239828 (+)	987	WP_127695472.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35285.95 Da
• Isoelectric Point: 4.9707

>NTDB_id=891013 RYX39_RS06290 WP_024120903.1 1234003..1234956(+) (med) [Bacillus halotolerans strain Q2H2]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTDEDIINAIED
FHKRGVNLLFGHGSEYEEVFNLVSEDYPDMQFVISNAKAKADNVTSVHLSGEAIGFFGGMTAAHMSKTNQVGVIASFSWQ
PEVDGFIKGAKYENPNIEVNTKYTDHWDDDSTAVNLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFDKGTLKGGDHYYDLKSRVVEMGTFSPLVDKAFQKKIAKLVKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=891013 RYX39_RS06290 WP_024120903.1 1234003..1234956(+) (med) [Bacillus halotolerans strain Q2H2]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTAAGCGGATGTGGACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCTAAATACAATGTGGACGTCTACTATAAAGAAGGCGTAAAAACAGATGAAGATATTATAAATGCGATTGAAGAT
TTTCATAAGCGCGGCGTCAATCTCCTCTTTGGCCATGGAAGTGAGTATGAAGAAGTATTTAACTTGGTCAGTGAAGACTA
TCCGGATATGCAGTTTGTGATTTCAAATGCAAAAGCAAAAGCGGACAATGTCACAAGCGTCCATCTCAGCGGGGAAGCAA
TCGGCTTTTTCGGCGGAATGACCGCTGCCCATATGTCAAAAACCAATCAGGTCGGCGTCATCGCTTCTTTTTCATGGCAG
CCAGAAGTGGACGGCTTTATAAAAGGGGCTAAGTACGAAAATCCTAATATAGAAGTGAATACAAAATATACGGATCACTG
GGATGATGATTCGACTGCGGTGAACCTTTATCAAAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCTGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGCCTATATGCGATCGGCTATGTCACAGATCAATCCGATCTT
GGCGAAAACACCGTGTTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATTATAGCTGAGCAATTCGACAAAGG
GACTTTAAAAGGCGGCGATCACTATTACGATCTGAAAAGCCGAGTTGTCGAAATGGGAACCTTCAGTCCGCTTGTGGACA
AAGCTTTTCAGAAAAAAATCGCCAAACTGGTCAAAACATATAACAAAACAGGTGAACTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	93.375	100	0.934