Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   RX793_RS07750 Genome accession   NZ_CP136263
Coordinates   1675309..1675707 (+) Length   132 a.a.
NCBI ID   WP_014304317.1    Uniprot ID   -
Organism   Bacillus velezensis strain 0039     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1670309..1680707
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RX793_RS07730 (RX793_07735) - 1672708..1673070 (-) 363 WP_014304320.1 winged helix-turn-helix transcriptional regulator -
  RX793_RS07735 (RX793_07740) hxlA 1673302..1673937 (+) 636 WP_024084873.1 3-hexulose-6-phosphate synthase -
  RX793_RS07740 (RX793_07745) hxlB 1673934..1674491 (+) 558 WP_003156587.1 6-phospho-3-hexuloisomerase -
  RX793_RS07745 (RX793_07750) nucA/comI 1674850..1675287 (+) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  RX793_RS07750 (RX793_07755) nin/comJ 1675309..1675707 (+) 399 WP_014304317.1 competence protein ComJ Regulator
  RX793_RS07755 (RX793_07760) - 1675748..1675966 (-) 219 Protein_1515 family 1 glycosylhydrolase -
  RX793_RS07760 - 1675998..1676243 (-) 246 WP_109567708.1 family 1 glycosylhydrolase -
  RX793_RS07765 (RX793_07765) - 1676185..1676460 (-) 276 WP_369719109.1 YckD family protein -
  RX793_RS07770 (RX793_07770) - 1676577..1677011 (-) 435 WP_021494203.1 RDD family protein -
  RX793_RS07775 (RX793_07775) - 1677026..1678162 (-) 1137 WP_003156594.1 zinc-dependent alcohol dehydrogenase -
  RX793_RS07780 (RX793_07780) - 1678227..1679429 (-) 1203 WP_024084872.1 GTP-binding protein -
  RX793_RS07785 (RX793_07785) - 1679543..1679707 (+) 165 WP_370648487.1 molybdopterin dinucleotide binding domain-containing protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 15049.01 Da        Isoelectric Point: 4.6564

>NTDB_id=889975 RX793_RS07750 WP_014304317.1 1675309..1675707(+) (nin/comJ) [Bacillus velezensis strain 0039]
MNKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVFRLNTSEPVLSYEKKATVPF
EAVKDGIEIESVMSKRLFFNIPKGRYSLTCYSVPAEISDLHADTYIIDADAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=889975 RX793_RS07750 WP_014304317.1 1675309..1675707(+) (nin/comJ) [Bacillus velezensis strain 0039]
TTGAATAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTCGAAGCAAGGAGAA
ATACGAGGGCATTTATCGTCTTCAGGCTTAACACAAGTGAACCGGTACTATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTTCTTTAATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGACGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

77.519

97.727

0.758