Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   RW107_RS06390 Genome accession   NZ_CP136257
Coordinates   1251267..1251458 (+) Length   63 a.a.
NCBI ID   WP_072175657.1    Uniprot ID   -
Organism   Bacillus subtilis strain A9     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1246267..1256458
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RW107_RS06360 (RW107_06360) argF 1247130..1248089 (+) 960 WP_046160277.1 ornithine carbamoyltransferase -
  RW107_RS06365 (RW107_06365) yjzC 1248175..1248354 (+) 180 WP_003245356.1 YjzC family protein -
  RW107_RS06370 (RW107_06370) yjzD 1248400..1248585 (-) 186 WP_003245236.1 YjzD family protein -
  RW107_RS06375 (RW107_06375) - 1248835..1249569 (+) 735 WP_041850982.1 hypothetical protein -
  RW107_RS06380 (RW107_06380) - 1249651..1250208 (+) 558 WP_014476424.1 hypothetical protein -
  RW107_RS06385 (RW107_06385) med 1250299..1251252 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  RW107_RS06390 (RW107_06390) comZ 1251267..1251458 (+) 192 WP_072175657.1 ComG operon transcriptional repressor ComZ Regulator
  RW107_RS06395 (RW107_06395) yjzB 1251488..1251715 (-) 228 WP_121591633.1 spore coat protein YjzB -
  RW107_RS06400 (RW107_06400) fabH 1251880..1252818 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  RW107_RS06405 (RW107_06405) fabF 1252841..1254082 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  RW107_RS06410 (RW107_06410) yjaZ 1254158..1254943 (+) 786 WP_021479557.1 DUF2268 domain-containing protein -
  RW107_RS06415 (RW107_06415) appD 1255135..1256121 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7248.29 Da        Isoelectric Point: 4.2564

>NTDB_id=889868 RW107_RS06390 WP_072175657.1 1251267..1251458(+) (comZ) [Bacillus subtilis strain A9]
MQHEKSLEFLQIAMKYFPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=889868 RW107_RS06390 WP_072175657.1 1251267..1251458(+) (comZ) [Bacillus subtilis strain A9]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATTTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

98.413

100

0.984