Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   RW107_RS02175 Genome accession   NZ_CP136257
Coordinates   435054..436004 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain A9     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 430054..441004
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RW107_RS02150 (RW107_02150) rapC 431514..432662 (+) 1149 WP_038828432.1 response regulator aspartate phosphatase RapC Regulator
  RW107_RS02155 (RW107_02155) phrC 432646..432768 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  RW107_RS02160 (RW107_02160) yczM 432868..432957 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  RW107_RS02165 (RW107_02165) yczN 433039..433152 (-) 114 WP_014478831.1 YjcZ family sporulation protein -
  RW107_RS02170 (RW107_02170) thrD 433305..434669 (-) 1365 WP_072173982.1 aspartate kinase -
  RW107_RS02175 (RW107_02175) ceuB 435054..436004 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  RW107_RS02180 (RW107_02180) yclO 435997..436944 (+) 948 WP_014475805.1 petrobactin ABC transporter permease YclO -
  RW107_RS02185 (RW107_02185) yclP 436938..437696 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  RW107_RS02190 (RW107_02190) yclQ 437718..438671 (+) 954 WP_014478834.1 petrobactin ABC transporter substrate-binding protein YclQ -
  RW107_RS02195 (RW107_02195) cdaE 438718..440136 (-) 1419 WP_003234482.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=889857 RW107_RS02175 WP_014475804.1 435054..436004(+) (ceuB) [Bacillus subtilis strain A9]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=889857 RW107_RS02175 WP_014475804.1 435054..436004(+) (ceuB) [Bacillus subtilis strain A9]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTAGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCATATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525