Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   AAFA13_RS18525 Genome accession   NZ_CP151690
Coordinates   3879838..3880473 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain F19-10-CH8     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3874838..3885473
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AAFA13_RS18505 (AAFA13_18505) - 3874915..3875730 (+) 816 WP_000011157.1 DsbC family protein -
  AAFA13_RS18510 (AAFA13_18510) - 3875975..3877276 (+) 1302 WP_000805827.1 homoserine dehydrogenase -
  AAFA13_RS18515 (AAFA13_18515) thrC 3877332..3878471 (+) 1140 WP_000063593.1 threonine synthase -
  AAFA13_RS18520 (AAFA13_18520) pbpG 3878579..3879625 (-) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  AAFA13_RS18525 (AAFA13_18525) letA 3879838..3880473 (+) 636 WP_000633799.1 response regulator Regulator
  AAFA13_RS18530 (AAFA13_18530) pilS 3880484..3882052 (+) 1569 WP_001160341.1 ATP-binding protein Regulator
  AAFA13_RS18535 (AAFA13_18535) - 3882077..3883498 (+) 1422 WP_000840547.1 sigma-54 dependent transcriptional regulator -
  AAFA13_RS18540 (AAFA13_18540) - 3883502..3884686 (-) 1185 WP_000939107.1 S41 family peptidase -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=889550 AAFA13_RS18525 WP_000633799.1 3879838..3880473(+) (letA) [Acinetobacter baumannii strain F19-10-CH8]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=889550 AAFA13_RS18525 WP_000633799.1 3879838..3880473(+) (letA) [Acinetobacter baumannii strain F19-10-CH8]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTTGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGTGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGTGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55