Detailed information NTG0088853

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: OC457_RS11900
• Genome accession: NZ_AP024854
• Coordinates: 2535140..2538517 (+)
• Length: 1125 a.a.
• NCBI ID: WP_210436112.1
• Uniprot ID: A0A1T4UR00
• Organism: Photobacterium toruni strain CECT 9189
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2530140..2543517

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OC457_RS11885	hemL	2530922..2532226 (+)	1305	WP_080176269.1	glutamate-1-semialdehyde 2,1-aminomutase	-
OC457_RS11890	-	2532609..2533694 (+)	1086	WP_080176270.1	AI-2E family transporter	-
OC457_RS11895	rsmC	2533851..2534870 (+)	1020	WP_080176271.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
OC457_RS11900	chiS	2535140..2538517 (+)	3378	WP_210436112.1	response regulator	Regulator
OC457_RS11905	-	2539262..2540938 (+)	1677	WP_080176273.1	ABC transporter substrate-binding protein	-
OC457_RS11910	-	2541085..2542071 (+)	987	WP_080176274.1	ABC transporter permease	-
OC457_RS11915	-	2542074..2543102 (+)	1029	WP_080176275.1	ABC transporter permease	-

Sequence

Protein

• Length: 1125 a.a.
• Molecular weight: 127173.13 Da
• Isoelectric Point: 6.6887

>NTDB_id=88853 OC457_RS11900 WP_210436112.1 2535140..2538517(+) (chiS) [Photobacterium toruni strain CECT 9189]
MQNTKRFKRLQHTLMLAFLVLSITPLILSALYFLNSHTKDLAEQSINHLASLRDNKHKQLQSFFTAKESEVKSFARSELS
NNSGGRFYGLVGAFHQLGNIDSQLDAQGRANYFNSTLTTKSNQTANSGYLGHERYRLMFKRYNAVYNEYLKRSDFKDIML
VDISGDVVYSVKNHGLFGVNLLAKNTSHIALQKTFEAIKKKTQQNPNNPEQVPVVFTDFSTNQHNNDTTAWFAAPIIQQG
YLHSYVFMELSNQKITELIQDNTKHIQTLLVGSDHKLRFETQTTLPIQLQSQSINQALAGKSGIGSFINYDNIPVLGAFS
PLNILNHHWALVVELPEKEAFARIFELEKIFVAAMVSAIILVIITSHWLSNSITAPLLRLTWAAEKASGGDLEQKIDGTE
RPDEIGRLAISFARMQRSIREKIGLIRQQNKELEHNLTIIRQQNNELQTADKMKDEFLATTSHELRTPLHGMVGIAESLL
AGANGALHQSQRRQLEMIINSGQRLTTLVDDLLDYHKMRYGDLDINHQAVDISVAIRLVLELSSHLLGNKPIRIINQIPT
DLPLVDADEQRLEQVLYNLVGNAIKYTSEGKIILSATVLEHQLRIQVVDTGQGIPSEQLEHIFEPLIQANTGSANYRQGA
GLGLSISRQLIELMGGRLYVSSQQMIGTTFSFTLNLANANQIAAMAANPNNNHFKAPLLNAANYDASDLPENPDGELLLI
VDDEPVNLQILTNFLRLAGYRVQTAESGPQALTLIAKQQPDLVLLDIMMPEMSGYEVCNKLRQTHSMLELPIIMLSALGQ
VQDRLKGFECGANDYLTKPFNKEELMARIRAYLQAGKTEIERKKNHALEQEIHRREQVEIGLLETQSRLLGLLDSTSEAI
ICVQQEGRIRYANSAAGKLFKRAPELLERYTIDDILVTPLPIAITDNHHFNGYLNYYIGEQQQQLMTDIINLPIESGLKQ
MFVFDSQGPSADHRIHLLESAIDVLSEFTFNGDKNNLQQLRELGGEFTRLADKLGDGEHNKTEIIRQLLVDSMKATLLFW
EAESHKSKFELAEESGLWRVYLDRSTLQTRTLDKYLQLETLPKTPRWRTVINTIDFVLDRCPQPNTSRQELVIMRDKLHH
IISHH

Nucleotide

• Length: 3378 bp

>NTDB_id=88853 OC457_RS11900 WP_210436112.1 2535140..2538517(+) (chiS) [Photobacterium toruni strain CECT 9189]
ATGCAGAATACTAAACGTTTCAAACGTCTTCAGCACACACTTATGCTCGCATTTTTAGTTCTCAGTATCACTCCGCTGAT
ATTGTCGGCACTCTATTTCCTTAATTCTCATACTAAAGATTTGGCAGAACAGAGCATCAACCACCTTGCTTCATTGCGTG
ATAATAAACATAAACAATTACAGAGTTTCTTTACAGCTAAAGAATCAGAAGTGAAAAGTTTCGCGCGATCAGAGCTATCA
AATAACAGTGGCGGAAGATTTTACGGTTTAGTTGGCGCATTCCATCAATTAGGTAATATTGATTCACAACTTGATGCTCA
AGGTCGAGCTAATTATTTTAATTCAACCCTTACCACTAAAAGCAATCAAACAGCGAATAGTGGTTATCTTGGTCATGAGC
GTTACCGATTAATGTTTAAACGGTATAACGCCGTTTATAATGAGTACCTAAAACGCTCTGATTTCAAAGATATTATGCTC
GTCGATATTTCTGGTGATGTTGTTTACTCAGTTAAAAATCATGGTCTTTTTGGGGTTAATCTATTAGCTAAAAACACCTC
TCACATAGCTTTACAGAAAACCTTTGAGGCCATTAAAAAGAAAACGCAACAAAATCCCAATAATCCAGAACAAGTCCCTG
TTGTGTTTACTGACTTTAGTACCAATCAACACAATAATGATACAACAGCATGGTTTGCCGCACCGATTATTCAACAAGGC
TACCTACATAGTTATGTCTTTATGGAACTAAGTAACCAAAAGATCACCGAACTAATCCAAGACAATACTAAGCATATTCA
AACCCTATTAGTCGGTAGTGATCATAAATTACGTTTTGAAACGCAAACTACATTGCCAATACAATTACAAAGCCAAAGTA
TCAATCAAGCCCTTGCTGGTAAATCCGGCATTGGTAGCTTTATTAACTATGACAATATTCCAGTATTAGGCGCATTTTCA
CCGCTAAATATATTAAATCACCACTGGGCATTGGTGGTTGAACTTCCAGAAAAAGAAGCCTTTGCGCGTATCTTTGAGTT
AGAAAAAATCTTTGTTGCGGCCATGGTTTCCGCCATTATTTTAGTGATCATTACTTCACATTGGCTCTCAAATTCTATTA
CAGCACCATTATTACGCTTAACTTGGGCCGCAGAAAAAGCCTCTGGTGGTGATTTAGAGCAAAAAATTGATGGCACCGAA
CGCCCCGATGAAATTGGACGGCTAGCGATCAGCTTTGCCCGTATGCAACGCTCAATTCGTGAGAAAATTGGTCTTATTCG
GCAACAAAATAAAGAGTTAGAGCATAACCTAACGATTATTCGTCAACAAAATAATGAACTGCAAACTGCAGATAAAATGA
AAGATGAATTTCTAGCCACAACATCACACGAATTGCGTACTCCATTGCATGGTATGGTGGGAATTGCAGAGTCTTTATTA
GCGGGAGCTAATGGTGCATTACATCAATCACAACGACGCCAATTAGAAATGATCATCAATAGTGGTCAACGTTTAACTAC
ACTCGTTGATGATCTGCTTGATTACCACAAAATGCGTTATGGCGATCTTGATATTAACCATCAAGCGGTTGATATATCAG
TAGCTATTCGCTTGGTTCTAGAATTATCAAGTCATTTGTTAGGTAATAAACCAATTCGAATTATTAATCAAATTCCAACG
GATCTCCCTCTCGTTGATGCCGATGAACAACGCCTAGAACAAGTGCTTTATAACTTGGTTGGTAATGCAATTAAATATAC
CTCTGAAGGTAAAATCATCTTATCGGCAACGGTATTAGAGCACCAATTACGTATTCAAGTTGTTGATACTGGACAAGGTA
TTCCTAGCGAACAATTGGAGCATATTTTTGAGCCACTTATTCAAGCTAATACGGGATCAGCAAATTACCGTCAAGGCGCA
GGACTTGGGTTATCAATTAGTCGTCAATTGATTGAACTTATGGGCGGGCGATTATATGTGAGTAGCCAACAAATGATTGG
TACCACCTTTAGTTTTACCCTTAATTTAGCCAATGCAAATCAAATCGCAGCCATGGCAGCAAACCCTAATAATAATCACT
TTAAAGCACCATTATTAAATGCGGCAAATTATGATGCGTCTGATTTACCTGAAAATCCAGATGGTGAATTATTACTGATT
GTTGATGATGAGCCTGTCAATTTACAAATATTAACCAATTTCTTACGTCTTGCAGGATATCGTGTTCAAACCGCAGAAAG
CGGCCCTCAAGCATTAACTTTGATTGCTAAACAACAGCCAGATTTAGTACTGCTTGATATTATGATGCCTGAAATGAGTG
GCTATGAAGTCTGTAATAAATTACGACAAACACATTCAATGTTGGAATTACCAATCATCATGTTATCAGCACTGGGGCAA
GTACAAGATCGCTTAAAAGGATTTGAATGTGGCGCCAATGACTATTTAACCAAACCGTTTAATAAAGAAGAGTTAATGGC
GCGTATTCGCGCCTATCTTCAAGCAGGTAAAACTGAAATTGAACGCAAAAAAAACCACGCGTTAGAACAAGAAATTCATC
GTCGTGAACAAGTTGAAATCGGTCTTTTAGAAACTCAAAGTCGTTTACTAGGATTATTAGATTCAACCAGTGAGGCTATT
ATTTGTGTGCAGCAGGAAGGTCGCATTCGGTACGCTAATAGCGCCGCTGGCAAACTGTTTAAACGCGCACCTGAATTATT
AGAACGTTATACCATTGATGATATTTTAGTCACACCATTACCAATCGCAATCACTGATAATCATCATTTTAATGGTTATC
TAAATTATTATATTGGTGAGCAACAGCAACAATTAATGACCGATATCATCAATTTACCTATAGAGTCCGGACTCAAACAA
ATGTTTGTTTTTGATAGCCAAGGACCATCAGCTGATCACCGTATTCATCTACTTGAAAGTGCGATTGATGTGTTATCTGA
ATTTACATTTAATGGCGATAAAAATAACCTTCAGCAGCTGCGAGAACTTGGCGGCGAATTTACCCGTTTGGCAGATAAAC
TTGGTGATGGAGAACACAACAAAACTGAAATAATTCGCCAATTATTAGTCGATTCAATGAAAGCAACCCTACTATTTTGG
GAAGCAGAATCTCATAAAAGTAAGTTTGAATTGGCGGAAGAGAGTGGTTTATGGCGAGTCTATTTAGATCGTAGTACGCT
TCAAACTCGAACGTTAGATAAATACCTTCAGCTTGAAACGTTACCCAAAACACCTCGTTGGCGAACCGTTATTAATACGA
TTGATTTTGTATTAGACCGTTGTCCACAACCTAATACTAGCCGCCAAGAACTAGTAATAATGCGAGATAAATTACATCAC
ATTATTAGTCATCACTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (368-421)

• Response regulator receiver domain (Response_reg) (719-830)

• His Kinase A (phospho-acceptor) domain (HisKA) (453-519)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (568-677)

3D structure

• AlphaFold DB: A0A1T4UR00

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	56.156	100	0.564