Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | OC457_RS02000 | Genome accession | NZ_AP024854 |
| Coordinates | 410229..410840 (-) | Length | 203 a.a. |
| NCBI ID | WP_080174519.1 | Uniprot ID | A0A1T4SNL4 |
| Organism | Photobacterium toruni strain CECT 9189 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 405229..415840
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OC457_RS01985 | - | 406329..407342 (+) | 1014 | WP_080174516.1 | Fe(3+) ABC transporter substrate-binding protein | - |
| OC457_RS01990 | - | 407513..409141 (+) | 1629 | WP_080174517.1 | iron ABC transporter permease | - |
| OC457_RS01995 | - | 409141..410181 (+) | 1041 | WP_080174518.1 | ABC transporter ATP-binding protein | - |
| OC457_RS02000 | opaR | 410229..410840 (-) | 612 | WP_080174519.1 | TetR/AcrR family transcriptional regulator | Regulator |
| OC457_RS02005 | hpt | 411065..411598 (+) | 534 | WP_080174520.1 | hypoxanthine phosphoribosyltransferase | - |
| OC457_RS02010 | can | 411648..412331 (-) | 684 | WP_080174521.1 | carbonate dehydratase | - |
| OC457_RS02015 | - | 412450..413385 (+) | 936 | WP_080174522.1 | ABC transporter ATP-binding protein | - |
| OC457_RS02020 | - | 413385..414155 (+) | 771 | WP_080174523.1 | ABC transporter permease | - |
| OC457_RS02025 | panC | 414261..415154 (-) | 894 | WP_080174524.1 | pantoate--beta-alanine ligase | - |
Sequence
Protein
Download Length: 203 a.a. Molecular weight: 23398.73 Da Isoelectric Point: 6.4852
>NTDB_id=88834 OC457_RS02000 WP_080174519.1 410229..410840(-) (opaR) [Photobacterium toruni strain CECT 9189]
MDTITKKPRTRLSPEKRKQQLLDYSIEVFSRRGIGRAGHADIAEMANVSVATVFNYFPTREALVEQVLMEVATQFNDLLT
ECIGAPNKALHARLTCISNNLIDTVLEQQDWIKVWFEWSTSVRDDVWPQFIESNQKNLKQVQKAFTQAIENGEINSVQTP
ENLAKMLHGMCYVIYMQANQHPDQDILREQAQIYLQVLTQKTK
MDTITKKPRTRLSPEKRKQQLLDYSIEVFSRRGIGRAGHADIAEMANVSVATVFNYFPTREALVEQVLMEVATQFNDLLT
ECIGAPNKALHARLTCISNNLIDTVLEQQDWIKVWFEWSTSVRDDVWPQFIESNQKNLKQVQKAFTQAIENGEINSVQTP
ENLAKMLHGMCYVIYMQANQHPDQDILREQAQIYLQVLTQKTK
Nucleotide
Download Length: 612 bp
>NTDB_id=88834 OC457_RS02000 WP_080174519.1 410229..410840(-) (opaR) [Photobacterium toruni strain CECT 9189]
ATGGATACGATTACCAAAAAACCACGTACACGCTTGTCTCCTGAAAAAAGAAAACAACAATTACTTGATTACTCAATTGA
AGTTTTTTCGCGCCGTGGTATTGGCCGCGCAGGTCATGCTGATATTGCTGAAATGGCTAATGTTTCGGTTGCAACTGTTT
TTAACTATTTTCCAACTAGAGAAGCACTAGTTGAACAAGTATTAATGGAAGTTGCCACCCAATTTAATGATTTACTGACT
GAATGTATTGGTGCGCCCAATAAAGCCTTACATGCACGCTTAACCTGCATCAGCAATAACTTAATTGATACCGTCTTAGA
GCAGCAAGATTGGATCAAAGTCTGGTTTGAATGGAGTACATCAGTACGTGATGATGTTTGGCCACAATTTATTGAAAGCA
ATCAAAAAAATCTTAAGCAAGTGCAAAAAGCATTTACTCAAGCAATCGAGAATGGCGAAATTAATTCAGTTCAAACTCCA
GAGAACTTAGCTAAGATGTTACATGGCATGTGTTATGTGATTTACATGCAAGCGAATCAACACCCAGATCAAGATATCCT
GCGTGAGCAAGCTCAAATTTATCTACAAGTTCTGACTCAGAAAACTAAATAA
ATGGATACGATTACCAAAAAACCACGTACACGCTTGTCTCCTGAAAAAAGAAAACAACAATTACTTGATTACTCAATTGA
AGTTTTTTCGCGCCGTGGTATTGGCCGCGCAGGTCATGCTGATATTGCTGAAATGGCTAATGTTTCGGTTGCAACTGTTT
TTAACTATTTTCCAACTAGAGAAGCACTAGTTGAACAAGTATTAATGGAAGTTGCCACCCAATTTAATGATTTACTGACT
GAATGTATTGGTGCGCCCAATAAAGCCTTACATGCACGCTTAACCTGCATCAGCAATAACTTAATTGATACCGTCTTAGA
GCAGCAAGATTGGATCAAAGTCTGGTTTGAATGGAGTACATCAGTACGTGATGATGTTTGGCCACAATTTATTGAAAGCA
ATCAAAAAAATCTTAAGCAAGTGCAAAAAGCATTTACTCAAGCAATCGAGAATGGCGAAATTAATTCAGTTCAAACTCCA
GAGAACTTAGCTAAGATGTTACATGGCATGTGTTATGTGATTTACATGCAAGCGAATCAACACCCAGATCAAGATATCCT
GCGTGAGCAAGCTCAAATTTATCTACAAGTTCTGACTCAGAAAACTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
52 |
98.522 |
0.512 |
| hapR | Vibrio cholerae C6706 |
45.408 |
96.552 |
0.438 |
| hapR | Vibrio cholerae strain A1552 |
45.408 |
96.552 |
0.438 |