Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | RS399_RS19575 | Genome accession | NZ_CP135973 |
| Coordinates | 3870514..3871551 (+) | Length | 345 a.a. |
| NCBI ID | WP_084993720.1 | Uniprot ID | - |
| Organism | Bacillus inaquosorum strain SI3 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3865514..3876551
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RS399_RS19550 (RS399_19550) | - | 3866352..3867680 (-) | 1329 | WP_084993716.1 | hemolysin family protein | - |
| RS399_RS19555 (RS399_19555) | corA | 3867824..3868768 (+) | 945 | WP_003236968.1 | magnesium transporter CorA | - |
| RS399_RS19560 (RS399_19560) | - | 3868831..3869241 (+) | 411 | WP_084993718.1 | CBS domain-containing protein | - |
| RS399_RS19565 (RS399_19565) | - | 3869264..3869494 (+) | 231 | WP_315957522.1 | hypothetical protein | - |
| RS399_RS19570 (RS399_19570) | comGA | 3869457..3870527 (+) | 1071 | WP_003236962.1 | competence protein ComGA | Machinery gene |
| RS399_RS19575 (RS399_19575) | comGB | 3870514..3871551 (+) | 1038 | WP_084993720.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| RS399_RS19580 (RS399_19580) | comGC | 3871565..3871861 (+) | 297 | WP_003236957.1 | comG operon protein ComGC | Machinery gene |
| RS399_RS19585 (RS399_19585) | comGD | 3871851..3872282 (+) | 432 | WP_084993722.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| RS399_RS19590 (RS399_19590) | comGE | 3872266..3872613 (+) | 348 | WP_084993724.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| RS399_RS19595 (RS399_19595) | comGF | 3872639..3873022 (+) | 384 | WP_084993726.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| RS399_RS19600 (RS399_19600) | comGG | 3873023..3873397 (+) | 375 | WP_084993728.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| RS399_RS19605 (RS399_19605) | - | 3873468..3873647 (+) | 180 | WP_003236949.1 | YqzE family protein | - |
| RS399_RS19610 (RS399_19610) | - | 3873689..3874015 (-) | 327 | WP_029316858.1 | YqzG/YhdC family protein | - |
| RS399_RS19615 (RS399_19615) | tapA | 3874288..3875052 (+) | 765 | WP_084993730.1 | amyloid fiber anchoring/assembly protein TapA | - |
| RS399_RS19620 (RS399_19620) | sipW | 3875036..3875608 (+) | 573 | WP_080010845.1 | signal peptidase I SipW | - |
| RS399_RS19625 (RS399_19625) | tasA | 3875672..3876457 (+) | 786 | WP_003236939.1 | biofilm matrix protein TasA | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39751.05 Da Isoelectric Point: 9.4134
>NTDB_id=888050 RS399_RS19575 WP_084993720.1 3870514..3871551(+) (comGB) [Bacillus inaquosorum strain SI3]
MKQIRKTWPLKDQAQLLKRLGEMTAGGYTLLDGLRLMELQMTKRQAADLTDAVIRLREGAPFYHVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQAIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILVALFAAGIGLYYWLVFKKKSPARQMLICVRIPLVGNLVRLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQVIERLKAGESIEAAICESPFYETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILIVYLSMLLPMYQMMNQM
MKQIRKTWPLKDQAQLLKRLGEMTAGGYTLLDGLRLMELQMTKRQAADLTDAVIRLREGAPFYHVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQAIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILVALFAAGIGLYYWLVFKKKSPARQMLICVRIPLVGNLVRLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQVIERLKAGESIEAAICESPFYETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILIVYLSMLLPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=888050 RS399_RS19575 WP_084993720.1 3870514..3871551(+) (comGB) [Bacillus inaquosorum strain SI3]
ATGAAACAGATTAGGAAAACTTGGCCGTTAAAGGATCAAGCCCAGTTATTAAAGCGGCTCGGTGAAATGACGGCGGGCGG
GTATACGCTTCTGGATGGATTACGCCTGATGGAACTCCAGATGACTAAGAGGCAGGCGGCTGACTTGACTGACGCAGTCA
TTCGTTTGAGGGAAGGGGCGCCGTTTTATCATGTATTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATCGCACAGGCAGA
CCAGCTGAAAAGGGTGCTGCGATATCCGCTTTTCCTCATCTTCACAGTCGCTGTCATGTTTTATATGTTACAGGCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACAGACATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTCTAGTGGCTCTTTTTGCAGCAGGTATCGGCCTTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCTAGGCAAATGCTTATTTGTGTCAGGATTCCTTTGGTTGGAAACCTTGTCAGGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAACGCATTTAAACACCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAAGTGATTGAACGGTTAAAAGCTGGTGAATCAATTGAAGCCGCTATTTG
TGAAAGCCCTTTTTATGAAACTGATTTTTCAAAAGTCATATCTCACGGCCAGCTAAGCGGCCGCCTGGATCGGGAGCTTT
TCACATACAGCCAGTTCATACTTCAGCGGCTGGAACACAAGGCGCAAAAATGGACAGGCATCCTTCAGCCTATGATTTAT
GGATTTGTGGCAGCGATGATCTTAATCGTGTATTTATCTATGCTCTTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAACAGATTAGGAAAACTTGGCCGTTAAAGGATCAAGCCCAGTTATTAAAGCGGCTCGGTGAAATGACGGCGGGCGG
GTATACGCTTCTGGATGGATTACGCCTGATGGAACTCCAGATGACTAAGAGGCAGGCGGCTGACTTGACTGACGCAGTCA
TTCGTTTGAGGGAAGGGGCGCCGTTTTATCATGTATTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATCGCACAGGCAGA
CCAGCTGAAAAGGGTGCTGCGATATCCGCTTTTCCTCATCTTCACAGTCGCTGTCATGTTTTATATGTTACAGGCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACAGACATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTCTAGTGGCTCTTTTTGCAGCAGGTATCGGCCTTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCTAGGCAAATGCTTATTTGTGTCAGGATTCCTTTGGTTGGAAACCTTGTCAGGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAACGCATTTAAACACCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAAGTGATTGAACGGTTAAAAGCTGGTGAATCAATTGAAGCCGCTATTTG
TGAAAGCCCTTTTTATGAAACTGATTTTTCAAAAGTCATATCTCACGGCCAGCTAAGCGGCCGCCTGGATCGGGAGCTTT
TCACATACAGCCAGTTCATACTTCAGCGGCTGGAACACAAGGCGCAAAAATGGACAGGCATCCTTCAGCCTATGATTTAT
GGATTTGTGGCAGCGATGATCTTAATCGTGTATTTATCTATGCTCTTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
93.808 |
93.623 |
0.878 |