Detailed information NTG0888047

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: RS399_RS19130
• Genome accession: NZ_CP135973
• Coordinates: 3790437..3792767 (+)
• Length: 776 a.a.
• NCBI ID: WP_084993894.1
• Uniprot ID: -
• Organism: Bacillus inaquosorum strain SI3
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3785437..3797767

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RS399_RS19090 (RS399_19090)	yhbY	3785674..3785964 (+)	291	WP_084993643.1	ribosome assembly RNA-binding protein YhbY	-
RS399_RS19095 (RS399_19095)	-	3785976..3786545 (+)	570	WP_019258940.1	nicotinate-nucleotide adenylyltransferase	-
RS399_RS19100 (RS399_19100)	yqeK	3786535..3787095 (+)	561	WP_084993645.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
RS399_RS19105 (RS399_19105)	rsfS	3787113..3787469 (+)	357	WP_003237112.1	ribosome silencing factor	-
RS399_RS19110 (RS399_19110)	-	3787466..3788209 (+)	744	WP_084993647.1	class I SAM-dependent methyltransferase	-
RS399_RS19115 (RS399_19115)	comER	3788275..3789096 (-)	822	WP_084993649.1	late competence protein ComER	-
RS399_RS19120 (RS399_19120)	comEA	3789180..3789797 (+)	618	WP_084993651.1	helix-hairpin-helix domain-containing protein	Machinery gene
RS399_RS19125 (RS399_19125)	-	3789864..3790433 (+)	570	WP_003237106.1	ComE operon protein 2	-
RS399_RS19130 (RS399_19130)	comEC	3790437..3792767 (+)	2331	WP_084993894.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
RS399_RS19135 (RS399_19135)	-	3792807..3792941 (-)	135	WP_003229983.1	YqzM family protein	-
RS399_RS19140 (RS399_19140)	-	3792982..3793131 (+)	150	WP_142271151.1	hypothetical protein	-
RS399_RS19145 (RS399_19145)	holA	3793171..3794214 (+)	1044	WP_084993653.1	DNA polymerase III subunit delta	-
RS399_RS19150 (RS399_19150)	rpsT	3794229..3794495 (-)	267	WP_003229989.1	30S ribosomal protein S20	-
RS399_RS19155 (RS399_19155)	gpr	3794698..3795804 (+)	1107	WP_084993655.1	GPR endopeptidase	-
RS399_RS19160 (RS399_19160)	spoIIP	3795867..3797072 (+)	1206	WP_003237102.1	spore autolysin SpoIIP	-
RS399_RS19165 (RS399_19165)	-	3797089..3797427 (+)	339	WP_003237101.1	YqxA family protein	-

Sequence

Protein

• Length: 776 a.a.
• Molecular weight: 86770.26 Da
• Isoelectric Point: 7.9193

>NTDB_id=888047 RS399_RS19130 WP_084993894.1 3790437..3792767(+) (comEC) [Bacillus inaquosorum strain SI3]
MRNSRLLLPLAAASATAGITAAAYFSAVFLFFLFLLIIFIKTRHAFLIFVCFFSFILFFALYTVTDSKNVSSYQQGTYKS
KAVIDSIPKIDGDRMSMVIKTPDSEKWAASYRIQSADEKDQLSYIEPGMSCELAGALEEPKHATVPGTFDYNEYLYRQHI
HWNYSVTYIHNCSKPLNFKDKLLSLRKYIVSLTNGLLPPDSAGIVQALTVGDRFYVEDEVLNAYQKLGVVHLLAISGLHV
GILTAGLFYIMIRLGITREKASLLLLLFLPLYVILTGAAPSVLRAALMSGIYLAGSLVKWRVHSAGAICLSYIVLLLFNP
YHLFEVGFQLSFAVSFTLILSSSIFQQLKTSLGQLTMVSIIAQLGSLPILLYHFQQFSIISIPMNMLMVPFYTFCVLPGA
VAGVYLLSFSASAGRFFFCWFDFLMSWTNRLITRIADIDVFTIIIARPAPALLFLFTVTIILLLMMIEKRSFSQLAITGG
LCCAVLCLLLIYPRLSSEGEVDMIDIGQGDSMYVGAPHQQGRVLIDTGGTLSYSSEPWREKQHPFSLGEKVLIPFLTAKG
IKQLDALILTHADQDHIGEAETLLKHHKVKRLVIPKGFVSEPKDEKVLRAAREEGVTIEEVKRGDVLQIKDLQFQVLSPE
TPDPASKNNSSLVLWMKTGGMSWILTGDLEKEGEQEVMNVFPNIKADVLKVGHHGSKGSTGEEFIKQLQPKTAIISAGEN
NRYHHPHQEVLQILQRHYIHVLRTDQSGTIQYRYKNRVGTFSVYPPYDTSDITETN

Nucleotide

• Length: 2331 bp

>NTDB_id=888047 RS399_RS19130 WP_084993894.1 3790437..3792767(+) (comEC) [Bacillus inaquosorum strain SI3]
ATGCGTAATTCGCGTTTGTTATTGCCTTTGGCGGCAGCTTCGGCAACGGCTGGAATTACTGCCGCCGCTTATTTCTCCGC
TGTTTTTCTTTTCTTCCTCTTTCTCCTCATCATTTTCATCAAAACGAGACACGCTTTTCTTATTTTTGTTTGTTTCTTCT
CTTTTATATTGTTTTTTGCACTGTACACGGTCACAGATTCCAAGAATGTCTCTTCGTATCAGCAGGGCACTTATAAATCC
AAGGCAGTGATTGACAGTATTCCTAAAATTGACGGAGACCGTATGTCTATGGTGATTAAGACACCTGATAGCGAAAAATG
GGCCGCTTCATATCGCATTCAGTCTGCTGATGAAAAAGATCAGCTGTCATACATAGAACCAGGAATGTCATGTGAGTTAG
CGGGTGCACTGGAAGAGCCCAAACACGCAACTGTGCCGGGCACATTTGATTATAACGAGTATCTTTACCGGCAGCATATT
CACTGGAACTATTCTGTCACATATATCCATAATTGCAGCAAACCTTTAAATTTTAAGGATAAACTGCTCAGTTTGAGAAA
ATACATCGTATCATTGACAAACGGACTGCTGCCTCCTGATTCGGCAGGAATCGTACAAGCACTTACAGTCGGTGACAGAT
TTTATGTGGAAGACGAAGTGCTTAACGCGTATCAAAAGCTTGGTGTCGTCCATCTCTTGGCAATTTCAGGACTTCATGTC
GGCATTTTGACAGCTGGGTTGTTTTATATCATGATTCGTCTAGGCATAACAAGAGAAAAGGCGTCACTCCTGTTGCTGCT
ATTTTTGCCGCTCTATGTGATTTTGACAGGCGCTGCTCCTTCAGTGCTTCGCGCCGCTCTGATGTCGGGTATTTACTTAG
CTGGGAGTCTCGTTAAATGGCGGGTACATTCTGCCGGTGCAATCTGCCTTTCATACATCGTACTCTTGCTCTTCAATCCT
TACCATCTCTTTGAAGTTGGTTTTCAGCTGTCATTCGCCGTCAGTTTTACTTTAATTCTATCCTCTTCTATTTTTCAACA
ACTCAAAACCTCACTGGGCCAGCTGACAATGGTATCTATAATCGCTCAGCTGGGCTCACTTCCTATTCTCTTGTATCATT
TCCAGCAGTTTTCGATAATCAGCATACCGATGAACATGTTGATGGTTCCTTTTTATACATTCTGTGTTTTGCCGGGGGCT
GTAGCAGGTGTTTATCTATTAAGCTTCTCCGCTTCGGCTGGTCGATTTTTCTTCTGCTGGTTTGATTTCTTGATGAGCTG
GACCAACAGGCTGATCACAAGAATTGCAGATATTGATGTATTCACGATCATCATTGCACGCCCCGCACCTGCTCTGCTCT
TTTTATTCACGGTTACGATCATCCTATTGCTTATGATGATTGAAAAACGTTCCTTTTCGCAGCTGGCGATTACTGGGGGT
CTTTGCTGCGCGGTGCTCTGTCTTCTTCTCATTTATCCGCGTCTTAGCTCCGAGGGAGAAGTCGATATGATTGATATTGG
GCAGGGTGACAGCATGTATGTCGGTGCTCCGCATCAGCAGGGACGTGTCTTAATTGATACAGGCGGCACTTTGTCTTACT
CATCAGAGCCTTGGCGGGAAAAACAGCACCCGTTTTCACTCGGGGAAAAGGTGCTGATTCCGTTTTTAACCGCCAAGGGA
ATCAAACAGCTTGATGCTTTGATTCTGACGCACGCTGACCAAGATCATATCGGAGAGGCGGAGACTCTGCTAAAGCACCA
TAAAGTGAAGCGCCTTGTGATTCCGAAAGGGTTCGTTTCTGAACCTAAAGACGAGAAAGTGCTGCGGGCAGCCAGAGAAG
AGGGCGTAACAATAGAGGAGGTGAAGCGAGGCGATGTATTGCAGATAAAGGATTTGCAGTTTCAAGTACTGTCACCGGAA
ACACCTGATCCGGCAAGCAAAAATAATTCTTCTCTCGTTCTGTGGATGAAAACAGGCGGTATGAGCTGGATCTTGACGGG
TGATCTGGAGAAAGAAGGAGAACAGGAGGTGATGAACGTGTTTCCAAATATAAAAGCAGACGTGTTAAAGGTGGGGCACC
ATGGAAGCAAAGGCTCTACCGGTGAAGAATTCATCAAACAGCTTCAGCCGAAAACGGCCATTATCTCAGCGGGAGAAAAC
AATCGGTACCATCATCCCCATCAAGAGGTTCTGCAAATATTACAGAGACATTACATCCACGTGCTGCGTACCGATCAAAG
CGGAACGATCCAATATCGATATAAAAACAGAGTTGGAACCTTTTCTGTCTATCCTCCATATGATACATCAGATATAACAG
AGACGAACTAA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (507-718)

• Competence protein (Competence) (208-469)

• Domain of unknown function (DUF4131) (DUF4131) (20-167)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	88.66	100	0.887