Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | RS399_RS10405 | Genome accession | NZ_CP135973 |
| Coordinates | 2108218..2110650 (-) | Length | 810 a.a. |
| NCBI ID | WP_019257273.1 | Uniprot ID | - |
| Organism | Bacillus inaquosorum strain SI3 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2103218..2115650
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RS399_RS10380 (RS399_10380) | ispF | 2103267..2103743 (-) | 477 | WP_084994983.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| RS399_RS10385 (RS399_10385) | ispD | 2103736..2104434 (-) | 699 | WP_084994986.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| RS399_RS10390 (RS399_10390) | - | 2104449..2105549 (-) | 1101 | WP_003242040.1 | PIN/TRAM domain-containing protein | - |
| RS399_RS10395 (RS399_10395) | disA | 2105665..2106747 (-) | 1083 | WP_003242042.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| RS399_RS10400 (RS399_10400) | radA | 2106751..2108127 (-) | 1377 | WP_003242044.1 | DNA repair protein RadA | Machinery gene |
| RS399_RS10405 (RS399_10405) | clpC | 2108218..2110650 (-) | 2433 | WP_019257273.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| RS399_RS10410 (RS399_10410) | - | 2110647..2111738 (-) | 1092 | WP_060397788.1 | protein arginine kinase | - |
| RS399_RS10415 (RS399_10415) | mcsA | 2111738..2112295 (-) | 558 | WP_019257271.1 | protein-arginine kinase activator protein McsA | - |
| RS399_RS10420 (RS399_10420) | ctsR | 2112309..2112773 (-) | 465 | WP_003242054.1 | transcriptional regulator CtsR | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90033.54 Da Isoelectric Point: 6.1203
>NTDB_id=888015 RS399_RS10405 WP_019257273.1 2108218..2110650(-) (clpC) [Bacillus inaquosorum strain SI3]
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLT
EIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDGE
FVVKTTAKTN
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSADESIQILKGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLT
EIVSLMSDQLTKRLKEQDLSIELTDAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDGE
FVVKTTAKTN
Nucleotide
Download Length: 2433 bp
>NTDB_id=888015 RS399_RS10405 WP_019257273.1 2108218..2110650(-) (clpC) [Bacillus inaquosorum strain SI3]
ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAAGTACTGGCGCTTGCACAGGAAGAAGCACTTCGTTTAGGTCATAA
TAACATTGGCACTGAGCATATTTTATTAGGACTGGTACGAGAAGGAGAAGGCATTGCTGCTAAAGCTCTTCAAGCGCTTG
GACTTGGTTCAGATAAAATACAAAAAGAAGTTGAAAGTTTAATTGGGCGCGGACAGGAAATGTCTCAAACGATTCATTAT
ACTCCAAGAGCTAAAAAAGTCATTGAGCTTTCAATGGATGAGGCAAGAAAACTTGGTCATTCTTATGTTGGAACAGAACA
TATTCTTCTTGGTCTGATTCGCGAAGGAGAAGGTGTTGCTGCGAGAGTCCTGAATAACCTCGGTGTCAGCTTAAATAAAG
CAAGACAGCAAGTGCTCCAGCTTCTTGGAAGCAATGAAACAGGATCATCAGCGGCAGGAACAAACAGCAATGCGAATACG
CCTACGCTTGACAGCTTGGCAAGAGACTTAACTGCTATTGCGAAGGAAGACAGTCTTGATCCTGTCATCGGCAGAAGCAA
GGAAATCCAGCGTGTAATCGAAGTGTTAAGCCGCAGAACGAAAAACAATCCTGTTCTCATTGGAGAACCAGGTGTAGGTA
AAACGGCGATTGCAGAAGGTTTGGCACAGCAAATTATCAATAACGAAGTTCCCGAAATCTTACGTGATAAACGCGTGATG
ACATTAGACATGGGAACAGTGGTTGCCGGTACAAAATACCGCGGAGAATTTGAGGATCGCCTGAAGAAGGTCATGGACGA
AATTCGCCAGGCAGGAAACATCATTCTATTCATCGATGAACTCCATACATTAATCGGAGCGGGCGGAGCAGAAGGTGCAA
TTGATGCATCTAACATTTTAAAACCTTCACTTGCTCGCGGCGAACTTCAATGTATTGGGGCGACGACTCTTGATGAGTAC
CGTAAATATATTGAAAAAGATGCAGCGTTGGAACGCCGTTTTCAGCCGATCCAGGTTGATCAGCCGTCTGCAGATGAAAG
TATTCAAATTTTAAAAGGCTTGCGTGATCGATATGAAGCTCACCACCGCGTATCAATTACAGATGATGCCATTGAAGCTG
CGGTTAAGCTTTCTGACAGATATATTTCTGACCGTTTCCTTCCGGATAAAGCAATTGACTTGATCGATGAAGCGGGTTCA
AAGGTGAGACTGCGCTCCTTTACAACGCCGCCTAACTTAAAAGAGCTTGAACAGAAGCTTGATGAGGTTCGTAAAGAGAA
GGATGCGGCAGTGCAAAGCCAGGAGTTTGAAAAAGCTGCTTCCTTGCGTGATACTGAGCAGCGCCTGCGCGAGCAAGTAG
AGGATACGAAGAAATCATGGAAAGAGAAGCAAGGACAGGAAAACTCAGAGGTTACTGTTGATGATATTGCGATGGTTGTT
TCCAGCTGGACTGGGGTGCCTGTATCTAAAATCGCCCAAACTGAAACAGATAAGCTTCTTAATATGGAAAGCATTCTTCA
CTCTCGTGTCATTGGCCAGGATGAAGCAGTTGTAGCTGTTGCAAAAGCAGTCAGACGTGCAAGAGCAGGGTTAAAAGACC
CTAAACGACCAATCGGCTCTTTTATTTTCTTAGGCCCTACAGGTGTAGGTAAAACAGAGCTTGCGCGAGCACTTGCTGAA
TCCATTTTCGGCGACGAAGAAGCCATGATCAGAATTGATATGTCTGAATACATGGAAAAACACTCAACTTCAAGACTTGT
CGGTTCACCTCCGGGATACGTAGGATACGATGAAGGCGGCCAATTAACAGAGAAAGTCAGAAGAAAACCTTACTCTGTCG
TGCTTCTTGATGAGATTGAGAAAGCGCACCCTGATGTTTTCAATATTCTTCTGCAAGTTCTTGAAGACGGACGGTTGACT
GATTCTAAAGGACGTACAGTCGATTTCCGCAATACCATTTTAATTATGACGTCAAACGTCGGAGCAAGTGAGCTGAAACG
CAATAAATATGTCGGCTTTAACGTTCAGGATGAGACGCAGAATCATAAAGACATGAAAGATAAAGTGATGGGTGAGCTGA
AACGTGCGTTCAGACCGGAGTTCATCAACCGGATCGATGAAATCATCGTCTTCCATTCACTTGAGAAAAAACACCTGACT
GAAATCGTGTCACTGATGTCTGATCAATTAACGAAACGCCTGAAAGAACAGGATCTTTCTATCGAATTGACAGATGCTGC
AAAAGCGAAAGTCGCGGAAGAGGGCGTTGATCTGGAATACGGTGCCCGTCCGTTAAGAAGAGCTATCCAAAAACATGTCG
AGGACCGTTTATCTGAAGAACTCCTCAGAGGAAATATTCATAAAGGACAGCATATTGTTCTCGATGTAGAAGATGGCGAA
TTTGTCGTAAAAACGACTGCTAAAACGAATTAA
ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAAGTACTGGCGCTTGCACAGGAAGAAGCACTTCGTTTAGGTCATAA
TAACATTGGCACTGAGCATATTTTATTAGGACTGGTACGAGAAGGAGAAGGCATTGCTGCTAAAGCTCTTCAAGCGCTTG
GACTTGGTTCAGATAAAATACAAAAAGAAGTTGAAAGTTTAATTGGGCGCGGACAGGAAATGTCTCAAACGATTCATTAT
ACTCCAAGAGCTAAAAAAGTCATTGAGCTTTCAATGGATGAGGCAAGAAAACTTGGTCATTCTTATGTTGGAACAGAACA
TATTCTTCTTGGTCTGATTCGCGAAGGAGAAGGTGTTGCTGCGAGAGTCCTGAATAACCTCGGTGTCAGCTTAAATAAAG
CAAGACAGCAAGTGCTCCAGCTTCTTGGAAGCAATGAAACAGGATCATCAGCGGCAGGAACAAACAGCAATGCGAATACG
CCTACGCTTGACAGCTTGGCAAGAGACTTAACTGCTATTGCGAAGGAAGACAGTCTTGATCCTGTCATCGGCAGAAGCAA
GGAAATCCAGCGTGTAATCGAAGTGTTAAGCCGCAGAACGAAAAACAATCCTGTTCTCATTGGAGAACCAGGTGTAGGTA
AAACGGCGATTGCAGAAGGTTTGGCACAGCAAATTATCAATAACGAAGTTCCCGAAATCTTACGTGATAAACGCGTGATG
ACATTAGACATGGGAACAGTGGTTGCCGGTACAAAATACCGCGGAGAATTTGAGGATCGCCTGAAGAAGGTCATGGACGA
AATTCGCCAGGCAGGAAACATCATTCTATTCATCGATGAACTCCATACATTAATCGGAGCGGGCGGAGCAGAAGGTGCAA
TTGATGCATCTAACATTTTAAAACCTTCACTTGCTCGCGGCGAACTTCAATGTATTGGGGCGACGACTCTTGATGAGTAC
CGTAAATATATTGAAAAAGATGCAGCGTTGGAACGCCGTTTTCAGCCGATCCAGGTTGATCAGCCGTCTGCAGATGAAAG
TATTCAAATTTTAAAAGGCTTGCGTGATCGATATGAAGCTCACCACCGCGTATCAATTACAGATGATGCCATTGAAGCTG
CGGTTAAGCTTTCTGACAGATATATTTCTGACCGTTTCCTTCCGGATAAAGCAATTGACTTGATCGATGAAGCGGGTTCA
AAGGTGAGACTGCGCTCCTTTACAACGCCGCCTAACTTAAAAGAGCTTGAACAGAAGCTTGATGAGGTTCGTAAAGAGAA
GGATGCGGCAGTGCAAAGCCAGGAGTTTGAAAAAGCTGCTTCCTTGCGTGATACTGAGCAGCGCCTGCGCGAGCAAGTAG
AGGATACGAAGAAATCATGGAAAGAGAAGCAAGGACAGGAAAACTCAGAGGTTACTGTTGATGATATTGCGATGGTTGTT
TCCAGCTGGACTGGGGTGCCTGTATCTAAAATCGCCCAAACTGAAACAGATAAGCTTCTTAATATGGAAAGCATTCTTCA
CTCTCGTGTCATTGGCCAGGATGAAGCAGTTGTAGCTGTTGCAAAAGCAGTCAGACGTGCAAGAGCAGGGTTAAAAGACC
CTAAACGACCAATCGGCTCTTTTATTTTCTTAGGCCCTACAGGTGTAGGTAAAACAGAGCTTGCGCGAGCACTTGCTGAA
TCCATTTTCGGCGACGAAGAAGCCATGATCAGAATTGATATGTCTGAATACATGGAAAAACACTCAACTTCAAGACTTGT
CGGTTCACCTCCGGGATACGTAGGATACGATGAAGGCGGCCAATTAACAGAGAAAGTCAGAAGAAAACCTTACTCTGTCG
TGCTTCTTGATGAGATTGAGAAAGCGCACCCTGATGTTTTCAATATTCTTCTGCAAGTTCTTGAAGACGGACGGTTGACT
GATTCTAAAGGACGTACAGTCGATTTCCGCAATACCATTTTAATTATGACGTCAAACGTCGGAGCAAGTGAGCTGAAACG
CAATAAATATGTCGGCTTTAACGTTCAGGATGAGACGCAGAATCATAAAGACATGAAAGATAAAGTGATGGGTGAGCTGA
AACGTGCGTTCAGACCGGAGTTCATCAACCGGATCGATGAAATCATCGTCTTCCATTCACTTGAGAAAAAACACCTGACT
GAAATCGTGTCACTGATGTCTGATCAATTAACGAAACGCCTGAAAGAACAGGATCTTTCTATCGAATTGACAGATGCTGC
AAAAGCGAAAGTCGCGGAAGAGGGCGTTGATCTGGAATACGGTGCCCGTCCGTTAAGAAGAGCTATCCAAAAACATGTCG
AGGACCGTTTATCTGAAGAACTCCTCAGAGGAAATATTCATAAAGGACAGCATATTGTTCTCGATGTAGAAGATGGCGAA
TTTGTCGTAAAAACGACTGCTAAAACGAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
99.383 |
100 |
0.994 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.374 |
99.012 |
0.499 |
| clpC | Streptococcus thermophilus LMD-9 |
46.602 |
100 |
0.474 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.359 |
100 |
0.472 |
| clpC | Streptococcus pneumoniae Rx1 |
45.241 |
99.877 |
0.452 |
| clpC | Streptococcus pneumoniae D39 |
45.241 |
99.877 |
0.452 |
| clpC | Streptococcus pneumoniae TIGR4 |
44.994 |
99.877 |
0.449 |
| clpC | Streptococcus mutans UA159 |
43.462 |
100 |
0.443 |
| clpE | Streptococcus mutans UA159 |
53.159 |
80.123 |
0.426 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.383 |
87.778 |
0.425 |
| clpE | Streptococcus pneumoniae TIGR4 |
53.612 |
76.914 |
0.412 |
| clpE | Streptococcus pneumoniae Rx1 |
53.612 |
76.914 |
0.412 |
| clpE | Streptococcus pneumoniae D39 |
53.612 |
76.914 |
0.412 |
| clpE | Streptococcus pneumoniae R6 |
53.612 |
76.914 |
0.412 |