Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   RS960_RS12985 Genome accession   NZ_CP135966
Coordinates   2618986..2619651 (-) Length   221 a.a.
NCBI ID   WP_000697877.1    Uniprot ID   A0A0D1JN68
Organism   Staphylococcus aureus strain ST5477     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2613986..2624651
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RS960_RS12965 (RS960_12965) - 2614452..2614565 (-) 114 WP_072357681.1 hypothetical protein -
  RS960_RS12970 (RS960_12970) - 2615228..2617228 (-) 2001 WP_317528766.1 ABC transporter permease -
  RS960_RS12975 (RS960_12975) - 2617225..2617980 (-) 756 WP_317528767.1 ABC transporter ATP-binding protein -
  RS960_RS12980 (RS960_12980) braS 2618088..2618975 (-) 888 WP_221915213.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  RS960_RS12985 (RS960_12985) braR 2618986..2619651 (-) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  RS960_RS12990 (RS960_12990) - 2619677..2619877 (-) 201 WP_000604725.1 hypothetical protein -
  RS960_RS12995 (RS960_12995) - 2620075..2621499 (+) 1425 WP_000948998.1 alkaline phosphatase -
  RS960_RS13505 - 2621559..2621660 (-) 102 WP_000731972.1 SE2200 family small protein -
  RS960_RS13005 (RS960_13005) - 2621782..2622237 (-) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  RS960_RS13010 (RS960_13010) - 2622482..2623243 (-) 762 WP_000323448.1 alpha/beta hydrolase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25415.49 Da        Isoelectric Point: 4.7961

>NTDB_id=887903 RS960_RS12985 WP_000697877.1 2618986..2619651(-) (braR) [Staphylococcus aureus strain ST5477]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=887903 RS960_RS12985 WP_000697877.1 2618986..2619651(-) (braR) [Staphylococcus aureus strain ST5477]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAACCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1JN68

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

100

100

1